Halomicronema hongdechloris: XM38_008820
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Entry
XM38_008820 CDS
T04928
Symbol
sigF_1
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
hhg
Halomicronema hongdechloris
Brite
KEGG Orthology (KO) [BR:
hhg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hhg03021
]
XM38_008820 (sigF_1)
Transcription machinery [BR:
hhg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
XM38_008820 (sigF_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r4_2
Sigma70_r3
Sigma70_ECF
HTH_24
HTH_Crp_2
HTH_23
HTH_3
MarR_2
KORA
GerE
HTH_8
HTH_30
HTH_11
GlnD_UR_UTase
DUF134
HTH_Tnp_ISL3
HTH_17
Motif
Other DBs
NCBI-ProteinID:
ASC69952
UniProt:
A0A1Z3HI05
LinkDB
All DBs
Position
904719..905498
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AA seq
259 aa
AA seq
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MQTQVTAALKDKTLILLKEYQQTASPDTRNRLVKLNLGLVRREAHRWLACSDETFDDLMQ
VGSLGLIRAIERFDLAKGYAFSSFAIPYIRGEIQHYLRDKGCSVRIPRRWQTLYTQGSAI
SRQLRLELNRPPQDREIAAKLDISLEEWQQVKLAVRNRWLVSLDAPIYDDEEGSASLGDV
LPDPKYKSFQLAQEDRIRLQQALHQLEQRTRDVLEFVFLHDLTQKETADRLGISSVTVSR
RVKQGLTRLRSLLGSTDET
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atgcaaactcaagtcaccgctgcgcttaaggataaaaccttgatcctgctgaaggagtat
cagcagactgcttccccagatacccgtaatcgcttggtgaagctgaacttgggcttggta
aggcgggaagctcatcgctggctggcatgttctgacgaaacctttgatgatttgatgcag
gtgggtagcctaggactcatccgagcaattgagcgcttcgatctcgctaagggctatgcc
tttagttcctttgcgattccttacatccgaggtgagattcagcactatctacgagacaaa
ggctgctctgtgcgaattccccggcgctggcagaccctctacacccagggcagtgccatt
agccgtcaactccgtttagagttgaatcggccccctcaagatagagaaattgctgcaaag
ttggatatctctctagaggaatggcaacaggttaaactggcggttcgtaatcgatggttg
gtcagtttggatgcaccaatttacgatgatgaagaggggtcagcgtctttaggcgatgtg
cttccggatcccaaatataagagttttcagctagctcaagaggatcgaattcggttgcaa
caagctctccatcaattggaacaacggacccgggatgtcttagagtttgtctttcttcat
gatctgacccaaaaggaaacagcagaccgtcttggcatcagttccgtaaccgtgtcccgg
cgagtgaagcagggcctgacgcgattacgatccctgttggggtctacagatgagacgtag
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