Halomicronema hongdechloris: XM38_011420
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Entry
XM38_011420 CDS
T04928
Symbol
dnaQ
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
hhg
Halomicronema hongdechloris
Pathway
hhg03030
DNA replication
hhg03430
Mismatch repair
hhg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hhg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
XM38_011420 (dnaQ)
03430 Mismatch repair
XM38_011420 (dnaQ)
03440 Homologous recombination
XM38_011420 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hhg03032
]
XM38_011420 (dnaQ)
03400 DNA repair and recombination proteins [BR:
hhg03400
]
XM38_011420 (dnaQ)
Enzymes [BR:
hhg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
XM38_011420 (dnaQ)
DNA replication proteins [BR:
hhg03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
XM38_011420 (dnaQ)
DNA repair and recombination proteins [BR:
hhg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
XM38_011420 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
HTH_17
Motif
Other DBs
NCBI-ProteinID:
ASC70212
UniProt:
A0A1Z3HIR7
LinkDB
All DBs
Position
complement(1189624..1190436)
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AA seq
270 aa
AA seq
DB search
MVAKALSGQSSLLATDLLAYYRQVSQSLLTVIDVETTGSLAYRSRVIEVSILQASLADGI
HQQQTFLINPGVRIPRIITRVTGITQEMVLQGEAPEVVWPQCRTALSQGILTAHNLEFDY
GFLQAEYQRLRQSYSRPANRRFCTVLLSRLLLADLPSRSLPNLVQHFGFDVGPSHRAGAD
TKACWLLAEGLLQQIQQESDQALLARFSQQWIRLKDAATLIGRPRQQVQRLMEEAGMEAR
MSRRGSRIFYRRGDVEQLYWAMRDQPPNFS
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atggttgccaaagccctatccggtcaatcttctttgcttgcgacagatctcttggcttac
taccgacaggtaagccaatcactcctgacagtcatcgatgtagaaaccacgggatccttg
gcctatcggtcccgggtgattgaagtctctatcctacaggctagtctggccgatggcatc
caccagcagcagacattcttgattaatccaggagtgcgtattccccgtatcattacccgg
gtcaccggtattacccaagagatggttctgcaaggggaggccccagaggtagtctggccc
cagtgtcgtactgctttaagtcagggaatcctgacagcccataacctggagtttgactac
ggctttttgcaagcagaataccaacgcttgcgacagtcctacagtcgccctgccaatagg
cggttctgcacagtgttgctatcgagactattgttggctgacctaccatcccgcagttta
cccaatctagtccaacactttggttttgatgtgggaccatcccatcgggctggtgccgat
actaaggcctgctggctgctagccgaagggttgctgcaacaaattcaacaggaatccgat
caggcattgctggctcgctttagccaacaatggattcgtctcaaggatgcagctaccctg
attggccgcccccggcagcaggtgcagcggctgatggaagaggccggcatggaagcccgc
atgtctcggcgaggcagtcgcatcttttatcgccgtggagatgtggagcagctgtactgg
gcaatgcgagaccaacctcccaatttttcctaa
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