Halomicronema hongdechloris: XM38_013230
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Entry
XM38_013230 CDS
T04928
Symbol
mutS_1
Name
(GenBank) DNA mismatch repair protein MutS
KO
K26273
protein strawberry notch
Organism
hhg
Halomicronema hongdechloris
Brite
KEGG Orthology (KO) [BR:
hhg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hhg03036
]
XM38_013230 (mutS_1)
Chromosome and associated proteins [BR:
hhg03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
XM38_013230 (mutS_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_4
AAA_34
DUF6908
MutS_I
ResIII
Helicase_C
Flavodoxin_NdrI
Motif
Other DBs
NCBI-ProteinID:
ASC70385
UniProt:
A0A1Z3HJC7
LinkDB
All DBs
Position
complement(1387387..1392480)
Genome browser
AA seq
1697 aa
AA seq
DB search
MNTPLSVDTPSDAYDVQPRQVPYVPKSQGFSTQTLIPCNMASAAQQALDQFEQQHGAIDA
YLATRLGYGSVEELHQYFSAEQVDAAALAIGNLEQGAGFITGDQTGIGKGRICASIMRYA
QQQGKIAIFITKDKPLYADMMRDVSDIGMRRFTPFITDSSTEIPLANGAALKTAGAAKQK
EEMQAIMQRGNLGHYSAVFTTYSQLQTVGKKEPLRRNFLRKLAPQAILILDEAHQAGGSK
GGWKEAGPPDRADFVRELIDKSSGVFYSSATYAKRPDVMDLYARRTDLRLGVSSMTALEN
ILTRGGVPLQQIVASKFVASGQMLRRERSYDGISFQANTVPVDRDVADDFSAAMRAIKDF
DRAKQRAVKTISKELKAEAKAIGEDGAIGEVGAKSTNFTSLMHNCIEQGLLAQKADATVQ
AAIAALQNCEKPVITVANTMGSFIQAYADAQDLKPGDEMNLSFADLLERYLERSRDVVTK
DYRGQANRLRLTDEQLGAEGVLAYEGALDCIREADFSGIPISPIDYIEQQLERAGFRVTE
VTGRKAGIDYAADGSMSYRVRSDQETTAKGKIDAVAKFNAGDADVILLNCSGSTGISLHA
SEKFADQRPRHMIVAQAERDINVFMQMLGRVHRTGQVALPSYTLLMGDLPAEKRPGAILC
RKMASLNANTTAARETDISLNNVVDFMNSYGEQVITELLADDPELNAKLDFPSAQAENDA
SDIALIKKVTGRIPLLPIEEQEALYSLIESEYRDLVDQARAMGESILEADQLDLDARPLA
RMEVVADEGNTRSEFTGPVYLEMVDAKSQTKPLTQLQVINAVREQVGLNGVRSVEEHDRD
DLENQSRQQTQATIAELETATEQYRQGAIAGKQDDKAIDKLNDRIHQQRAHVTSVLEEFP
PGMPLRLVTPASKSIFYGVVAGIDAKKRSGSPAAPNRWKLRILVADSVRQLTVPLSKFNT
GRGGSLEAMVQTEDWFGNDVYGLFDKQQEAGRVNRQIFTGNLIKAFEKYPNGKLLNYTDY
QGQVRQGLMMPKGFDIQEELTKEPVAFSTPQQVMTFITELTSRRGIVKTLDELLILKTQF
NGEGFVLQTPKSKESGGKYFLDEGLIAVAGSDFYSVGDRMEVVIPPERLEQTLAVLMHQR
NYTLAAFESKDIARQFLGVTLPSLEKVEAAAPKASVTPALHVIQPPVSSPTTETPGPKPT
VEAPTVSASTGSNHPQMGQLEKRILRFLREAGIDQAVMNTDEFHLRIENEPFIPLVVERQ
GDELYLTHYLTQNGDMYIDAEMVFTVLPEGQLQFKETAVQTPYGGESRIPDRQFAQIFSK
NILKQGFAEAAKAQQQESQEEKVAAKPEIQSPGSPTQSDRQALPADVQQYLTVKDQHSEA
MVLVQTSDRRFYETFFDDAKQLAQTLDLILTSQTCTAPGAERIPASGFPVKSLEKYLEPL
RQVSEVAIADWQGETTVHTQLESSAVVEATSPLVPTSEPVQSVTVVETQEPEFQVQSLFD
TNQFSAAPPNRRQVQPQEPPQTLETAVPEALPSRSQGTPATLEALRDWYRAARDLGHDPL
HLEKIKQLGISARDANGHGFTVAAADQQAMAQDMALYQAFQQRGEFVAQVSQHILSAIGQ
GQGPDTLFRGKTYELQQTGDRLIVRKVAPQPQTILEMAAGKIQRTVVTADDCHRFQRFAQ
HLETTRTQTATCAGRER
NT seq
5094 nt
NT seq
+upstream
nt +downstream
nt
atgaataccccgctttccgttgataccccttcagacgcctatgatgtccagccccgccag
gtgccctatgtgcccaaaagtcagggtttctccactcaaacgctgattccctgcaacatg
gccagcgcggctcaacaggctctcgaccagttcgagcagcagcatggggctattgatgct
tatctagcgactcgcttaggctacggctccgttgaagagctgcaccaatatttcagtgct
gagcaggtggatgctgccgccctggcgatcggtaacttggaacagggagcaggctttatc
acgggcgaccagaccggcatcggcaaagggcgcatctgtgccagcatcatgcgctatgcc
cagcagcaaggcaaaatcgccattttcatcaccaaagacaagcccctctacgccgacatg
atgcgcgatgtcagcgatatcgggatgcggcgatttacccccttcattaccgatagcagc
actgaaattccgctggctaatggggcggccttgaagacggcaggagcggcgaagcagaaa
gaagaaatgcaggccataatgcagcggggcaatctggggcattacagcgctgtcttcacc
acctatagccagctgcagacggtggggaagaaggagccgttgcggcggaactttctccgt
aagctggctccccaggcgattttaattctggatgaagcccatcaagcgggcggcagcaaa
gggggatggaaggaagcgggtccccctgaccgggccgacttcgtccgagagctgatcgac
aagtcctccggcgtcttttactcctccgcgacctacgccaaacgtcccgacgtgatggat
ctctacgctcgccgcactgacctgcgcctgggcgttagcagcatgactgcactggagaat
atcctcacccgtggcggtgtccccttacagcagattgtggccagcaagtttgtcgcttcc
gggcagatgctgcggcgagagcgctcctatgacggcatctcctttcaggccaatacggtt
cccgtagatcgcgatgtcgcagacgacttctccgctgccatgcgggccatcaaagacttt
gaccgagccaaacaacgagcagtcaaaaccatcagcaaagaactgaaggccgaagccaag
gcgattggggaagatggggcgatcggggaagtcggagcgaagagtaccaactttacgtcg
ctgatgcacaactgcattgagcaaggcttgttggcgcaaaaggccgatgccaccgtgcag
gccgcgatcgcggccctccagaactgtgaaaagcccgtgattaccgtggccaacaccatg
ggcagtttcattcaggcctatgccgatgcccaggacttgaagccgggagatgagatgaat
ctctccttcgcggatttactggaacggtatctagagcgatcgcgggatgtcgtcaccaag
gactaccggggacaggccaatcgcttgcggctaacggatgagcaactgggagccgaagga
gtccttgcttacgaaggggcgctggactgcattcgggaagcagacttcagcggcattcct
atcagcccgattgactacatcgaacagcagttggagcgagcggggttccgcgtcactgaa
gtcactggacgtaaagctggcattgactatgcggctgatggttccatgagttatcgggtg
cgatcggatcaagagaccacggctaaaggcaagatcgatgcggtggccaagttcaacgcc
ggggatgccgatgtcattctcctgaactgctcgggctccaccggcatctcactccacgcc
tctgaaaagttcgccgaccagcgtccgcgccacatgattgtggcccaggccgaacgggat
atcaacgtgttcatgcagatgctgggacgggtccatcgcaccggacaggtggctctgccc
agctacaccttattgatgggcgatctgcctgccgaaaagcgaccgggggcgattctctgt
cgcaagatggctagcctcaacgccaacactactgccgcacgggagacggatatctctctg
aacaacgtggtggactttatgaattcctacggggagcaggtgatcaccgaactgctagca
gatgacccagaactcaatgccaagttggacttcccctccgcccaagcggaaaacgatgcc
tccgatatcgccctgattaagaaggtgaccgggcgaattcccctgctgccgattgaggag
caggaagccctctacagcctgattgagtcggaataccgagacctggtggaccaagccaga
gccatgggcgagagcattttggaggcagaccaactcgaccttgatgcccgtcctctggcg
cgaatggaggtggtggccgatgaaggcaacacccgcagtgagtttaccggacccgtttat
ctggagatggtggacgcaaagagccagaccaagcccctaacccagttgcaggtgatcaat
gcggtacgggaacaggtgggcctgaacggtgtgaggtcagttgaggagcacgatcgggat
gacttagaaaaccagtcccgccagcaaacccaggcaaccattgcggagttagagacagcc
acggaacagtatcggcagggggcgatcgctggaaaacaggacgacaaagccattgacaag
ctcaatgatcgcatccatcagcaacgggctcatgtcaccagcgtcctagaggagtttccg
ccggggatgccattacggttggtcacgcccgccagcaaatccatcttctacggggtggtc
gctgggattgatgccaagaagcgctccggcagtcccgctgccccgaaccgctggaagctg
cggattctggtggccgattcagtccgtcagttgacggtgcccctgtctaagttcaatacc
ggacggggtgggtcattggaggccatggttcaaaccgaagattggttcggcaatgatgtt
tatggcctgttcgataagcagcaggaagccgggcgcgtcaatcggcaaatcttcaccggc
aacttgatcaaggcgtttgagaagtacccgaatggcaagttgctgaattacaccgactac
caggggcaggtacgccaggggctgatgatgcccaagggctttgacattcaggaagagctg
accaaagagccggtggccttcagcactccgcaacaggtgatgaccttcatcacggaactg
accagccgccgaggcattgtgaaaacgctggatgaactgttgattctcaaaacgcagttc
aacggtgaaggctttgtgctgcaaacccccaaatcaaaggagtcgggaggcaaatatttt
ctagatgaggggttgattgctgttgccggatcggacttctattccgtgggcgatcgcatg
gaagtcgttattccgcccgaacggttggagcagaccctagcggtgctaatgcatcagcgc
aactacaccctggccgcttttgaatccaaagatatcgctcgacagttccttggtgtgacc
ctaccaagcctggaaaaggtggaagcagcagcacccaaagcttcagtaactcctgccctc
cacgttatccaacctccagtctccagtcctacaactgaaacgccaggaccaaaacctacg
gttgaggctccgacggtaagcgcctccactggctccaatcatccccagatggggcagttg
gaaaagcgaattctccgatttctgcgggaggcgggcattgatcaggcggtaatgaacacc
gatgagttccacttgcggattgagaatgagcccttcatcccactcgttgtggagcgtcag
ggggatgagttgtatctaacccactacctgacccagaacggcgacatgtacattgacgct
gagatggtcttcacggtgctgccagaagggcagctgcagtttaaggagaccgccgtgcaa
acgccctatggcggcgaatctcgtattcccgatcgccagtttgcccagatcttttccaag
aacatcttgaagcagggctttgccgaagcagccaaggcgcaacagcaagagtcccaagaa
gagaaggtggcagcaaaaccggaaatccaatctccgggtagccctacgcagagtgatcgg
caggctttgcccgcagatgttcagcaatatctgaccgtcaaagaccagcattccgaggca
atggtgctggttcaaacgagcgatcgccgcttctacgagaccttctttgatgatgccaaa
cagctggcccaaaccctcgatctaattctcaccagccagacatgcaccgctcccggcgct
gagagaattccagcatcaggtttcccagtgaaaagtctggagaagtatctggagccactg
aggcaggtgagtgaggtggcgatcgcggactggcagggagaaaccacagttcatacgcag
ctagaaagctccgcagttgtcgaagcaacctcgcccctggtccccacatcagaacccgtt
cagtcagtgacagtggtagaaacgcaagaacctgagttccaagtccagagcctctttgat
accaatcagttcagtgcggctcctccaaataggcggcaggtgcagccccaagagccacct
caaacgctcgagacggctgttcctgaagctctcccctctcggtcgcaaggaacacctgcc
accctagaagcccttcgggactggtatcgggcggctcgtgatttagggcatgacccactg
cacctggaaaaaattaagcagctaggtatctctgccagagatgcgaatggtcatggtttt
accgtggcggcagcagaccagcaggccatggcccaagacatggctctatatcaagctttc
cagcagcggggcgagttcgttgcccaagtgtcacagcatattctgtccgccatcggtcaa
ggccagggaccagacaccctatttcgcggcaagacctatgaactgcagcaaacgggcgat
cgcctcatcgttcgcaaggttgccccccagccccaaaccattctggaaatggcggcaggc
aagattcaacgcacagtggttaccgccgacgattgccaccgttttcaacggtttgcccag
cacttggaaactacgcgcacgcagaccgcaacctgtgcaggcagagaacgatga
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