Halomicronema hongdechloris: XM38_014770
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Entry
XM38_014770 CDS
T04928
Symbol
xthA
Name
(GenBank) Exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
hhg
Halomicronema hongdechloris
Pathway
hhg03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hhg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
XM38_014770 (xthA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hhg03400
]
XM38_014770 (xthA)
Enzymes [BR:
hhg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
XM38_014770 (xthA)
DNA repair and recombination proteins [BR:
hhg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
XM38_014770 (xthA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
AraC_binding
Motif
Other DBs
NCBI-ProteinID:
ASC70538
UniProt:
A0A1Z3HJQ8
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All DBs
Position
complement(1572354..1573178)
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AA seq
274 aa
AA seq
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MLGDATLPYPMQVATWNINSIRTRLPHVTQWLQDHVVDVLCLQETKVIDGDFPLQAFEDI
GYQAHVYGQKAYNGVAMISRVPLQRVRKGFAAILAADRVGDLDAQKRVISAVIGDICIVN
LYVPNGASVGSQKYDYKLRWLHCLRDYLQQLLAEYPNLNVCGDFNVALEDRDIYDASDKA
NHIMASAAERQALQTVLGIGLQDAFRKFTAEPGQFSWWDYRAASFRRNLGWRIDHHYLSD
PLYERAISCTIDVEPRKLEKPSDHAPVIVEYPTP
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgctaggagacgcgactcttccctatcctatgcaagttgccacctggaatatcaactcc
attcgcactcgcctaccccatgtgacccagtggctacaggaccatgtcgttgatgtgctg
tgtctgcaggaaaccaaggtgatcgatggagactttcctctgcaggccttcgaagacatc
ggctatcaggcccatgtctacggacagaaagcctacaatggggttgccatgattagccgc
gtgccgctgcagcgagtccggaaaggttttgcggcgatattggcagcggaccgagtgggc
gatctcgacgcccaaaagcgggtgatcagcgctgtgatcggggatatttgtatcgtcaat
ctctatgtgcccaatggcgccagcgtcggcagtcaaaagtatgattacaaactgcggtgg
ctgcactgcttacgggattatctgcagcagctattagcggagtaccctaacctcaatgtc
tgtggtgactttaatgttgccctagaggatcgagatatctacgatgccagtgataaagcc
aatcatatcatggcctctgctgccgaacgtcaggccctgcaaacggtgctagggattgga
ctgcaggatgcctttcgcaaattcactgcagagcccggccagtttagttggtgggattat
cgggccgcatcctttcgccgtaacctgggctggcgtatcgatcatcactatctctccgat
cccctatacgagcgggcgattagctgcaccattgatgtcgaaccgcgtaaattagagaaa
cctagtgaccatgctcctgtgatcgtggagtatcccactccctag
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