Halomicronema hongdechloris: XM38_016360
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Entry
XM38_016360 CDS
T04928
Symbol
cpcF
Name
(GenBank) Phycocyanobilin lyase subunit beta
KO
K02289
phycocyanobilin lyase subunit beta [EC:
4.4.1.32
]
Organism
hhg
Halomicronema hongdechloris
Pathway
hhg00196
Photosynthesis - antenna proteins
hhg01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
hhg00001
]
09100 Metabolism
09102 Energy metabolism
00196 Photosynthesis - antenna proteins
XM38_016360 (cpcF)
09180 Brite Hierarchies
09181 Protein families: metabolism
00194 Photosynthesis proteins [BR:
hhg00194
]
XM38_016360 (cpcF)
Enzymes [BR:
hhg01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.32 C-phycocyanin alpha-cysteine-84 phycocyanobilin lyase
XM38_016360 (cpcF)
Photosynthesis proteins [BR:
hhg00194
]
Antenna proteins
Phycobilisome - Cyanobacteria, Red alga [OT]
Phycocyanin (PC)
XM38_016360 (cpcF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_2
HEAT_PBS
HEAT
HEAT_EZ
Cnd1
Motif
Other DBs
NCBI-ProteinID:
ASC70691
UniProt:
A0A1V8NP17
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All DBs
Position
complement(1736544..1737221)
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AA seq
225 aa
AA seq
DB search
MSEDLSTLIAAVEQADSATALVGAVRALAMAEHVEAIPTLIEVLGYNNPGAAVAAVDGLV
RLDQAAVPALLAHLDGYNYGARAWAIRALALIGDPRALGVLVEAASQDFALSVRRAAAKG
LGSLRWQELPPEQIAPAQTQAFNILLQGCNDPEWVVRYAAIVGLQCLATDLGTPDLPLSP
VKKLQQQLQHLSRQDESPAVQARAQLALDHLTSTPSPLVGPHGGQ
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaagatctatctaccctgattgcggctgtcgagcaagccgattctgcgacagcc
ttagtaggagctgtgcgagctttggctatggctgagcatgtagaggccattcctaccctg
atagaggtcctgggctacaacaatccaggcgctgcggttgccgccgtggatggattagta
cgtctagaccaggcagcagtgcccgccttgctggcccatcttgatggctacaactacgga
gctcgagcttgggcgattcgggcgctagcgttgattggtgatcccagagccttaggcgta
ctagtagaagccgccagccaggattttgccttgagtgttcgccgagccgcagccaagggc
ttagggagtctccgctggcaagaactgccccctgagcagattgcaccggcccagactcaa
gctttcaacatcttgctgcagggctgcaacgatcctgaatgggtcgtacgctatgccgca
atcgtggggctacaatgccttgccactgacttaggcacacccgatcttcccctttctccc
gtaaagaaattacagcagcagttgcagcatctatcccggcaggatgagagtccggcggtg
caagcccgggctcaactcgccctagatcacctgacaagtactccctctccattggtaggg
ccccacggtggccagtga
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