Halomicronema hongdechloris: XM38_018210
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Entry
XM38_018210 CDS
T04928
Symbol
lysS_2
Name
(GenBank) Lysine--tRNA ligase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
hhg
Halomicronema hongdechloris
Pathway
hhg00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
hhg00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
XM38_018210 (lysS_2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
hhg01007
]
XM38_018210 (lysS_2)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hhg03016
]
XM38_018210 (lysS_2)
Enzymes [BR:
hhg01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
XM38_018210 (lysS_2)
Amino acid related enzymes [BR:
hhg01007
]
Aminoacyl-tRNA synthetase
Class II (A)
XM38_018210 (lysS_2)
Transfer RNA biogenesis [BR:
hhg03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
XM38_018210 (lysS_2)
Prokaryotic type
Other AARSs
XM38_018210 (lysS_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
ASC70873
UniProt:
A0A1Z3HKQ0
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All DBs
Position
1915959..1917521
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AA seq
520 aa
AA seq
DB search
MASDSISSDAHSGSSREDIRAARLDKVAQLQQLGVNPFAYKWTTTHTAADLQAKYADLDA
GAELDVEISVAGRIMARRVFGKLAFFGLQDETGTIQLYLDKKTIQQGMADRDPQAFNHLK
HLTDVGDILGAHGTLKRTEKGELSVKVQQYAMLTKSLLPLPDKWHGLTDVAKRYRQRYVD
LIVNPEVRQTFRQRALITAGIRRYLEDRGFLEIETPVLQTDAGGAEARPFTTYHNALEMP
LYLRIATELHLKRLVVGGFEKVFEIGRIFRNEGVSTRHNPEFTSVEFYQAYADYHDFMAL
TEEMVATIAQEVLGTLSITYQGDTIDLSPPWRRVTMHELVQAHTGLDFHQFATLAEAKAA
VKQLNLHGVEDCDSLGKLLNQVFEQTIEATLIQPTFLMDHPLEISPLSKPHRSKPGVVER
FELFIAGRETANGFSELTDPIDQRQRFEQQAARKAAGDLEAQGVDEDFLTALEYGMPPTC
GAGIGIDRLVMLLTDCASIRDAIAFPLLKPDRGDDTEKTP
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atggcctcagattccatttcatcggatgcccacagtggttcctcacgcgaggacattcgc
gccgctcgcctcgacaaggtagcgcaactacagcagcttggtgtcaatccctttgcctat
aaatggaccaccacccacaccgccgctgatttacaggccaagtatgccgacctagacgcg
ggggcagagttggatgtggagatctctgtagcaggccgaattatggcccggcgtgtgttt
ggtaagctggccttctttgggctccaggacgaaactgggaccattcagctctacctcgac
aagaaaaccattcaacagggcatggcggacagggatccccaggccttcaatcacctgaag
cacctcacggatgtgggcgatatcctcggcgcccacggcaccctgaagcgcaccgagaag
ggggaactatcggtgaaggtgcagcagtatgccatgttgactaaatccttgctgccccta
cccgataaatggcatggcctcaccgatgtggccaagcgctatcgccaacgctatgtggat
ttgatcgtcaaccccgaggtgcgccagacctttcgccagcgagccttgattactgctggt
atccgtcgttacttagaggatcgagggtttttagaaattgaaacgccggtgcttcaaacc
gacgccggaggggcagaggcgcgcccctttaccacctatcacaatgccctggagatgccc
ctctacctgcgcatcgccacagaactgcacctgaaacggttggtcgtgggcggctttgaa
aaagtcttcgaaattggccgcatttttcgcaatgaaggggtctctacccgccacaatcca
gaatttaccagcgtcgaattttatcaggcttacgccgactaccacgatttcatggcactc
actgaagagatggtggccaccattgcccaagaggtgctgggaactctgagcattacctat
cagggtgacaccattgacctcagccctccctggcggcgggtaaccatgcatgagctggtg
caggcgcatacggggctagactttcaccaatttgccactctggcggaggccaaggcggca
gtcaagcagctgaacttgcatggggtggaagactgtgactcgctggggaagctgctgaat
caagtgtttgagcaaaccatcgaagccaccttgattcaacccacgtttctgatggaccat
ccgctggaaatttctcccctatcgaagccccatcgcagtaagccaggagtagtcgagcgg
tttgaattatttatcgccgggcgggagacggccaacggcttctcggagctgaccgatccc
atcgatcaacgccagcggtttgaacagcaggcggcccgcaaggcggctggcgatctagaa
gctcagggggtggacgaagatttcctcacggctctggagtatggcatgcccccgacctgt
ggggctggcatcggtatcgatcggctggtgatgttgttgaccgactgtgctagcattcgc
gatgcgatcgcatttcccctactcaaacccgaccgtggcgacgacaccgagaaaactcca
tag
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