Halomicronema hongdechloris: XM38_022860
Help
Entry
XM38_022860 CDS
T04928
Name
(GenBank) ABC transporter transmembrane region
KO
K11004
ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
Organism
hhg
Halomicronema hongdechloris
Pathway
hhg02010
ABC transporters
hhg03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
hhg00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
XM38_022860
03070 Bacterial secretion system
XM38_022860
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hhg02000
]
XM38_022860
02044 Secretion system [BR:
hhg02044
]
XM38_022860
Transporters [BR:
hhg02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
XM38_022860
Secretion system [BR:
hhg02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
XM38_022860
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
Peptidase_C39
AAA_22
AAA_16
AAA_29
ABC_ATPase
DUF87
AAA_23
SbcC_Walker_B
AAA_21
RsgA_GTPase
nSTAND1
AAA_30
NB-ARC
ABC_membrane_3
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
ASC71334
UniProt:
A0A1Z3HM13
LinkDB
All DBs
Position
2427197..2429530
Genome browser
AA seq
777 aa
AA seq
DB search
MVGFPPLTPPTAETADAETTSAPTPAAFSEATVYTGDTVEADTIPLAPPPSTDGGDDAAD
TKGNYPHVRGRGDIEGTLACFEMLSQLFNMPFRRDVIRRVLVTQQQRLGQVSLPLCGAIA
EMVGLRSQLVKLPASAMPRLKTPALITWQDGIAILYETNQKTYVIGDPEVGIRRRTPLEF
EEVWGQSGDVLLLETTKETPQQRFGLQWFLPYLKRYRWVLLEVFVASFFVQLFGLANPLM
VQVIIDRVIVQNSIDTLHVLGIFLVVVAIFEAILSSLRTYLFVDTTNRIDMSLGSEIIDH
LLRLPLRYFDRRPVGELSSRINELENIRQFLTGTALTVVLDAVFSVIYIVVMFIYSWLLT
LVALASIPLFVLLTALVAPIVRRQLRIKAERNAATQAHLVESLSGIQTVKAQNLELRTRW
RWQERYAQYVSAGFNTVLTSTTAGSASNFLNKLSALLVLWVGAYLVLQGELTLGQLIAFR
IISGYVTAPILRLAQLWQNFQETALSLERLSDIIDHPQETDEADRDQIPMPHIQGRVQYE
NISFRFAPSGPLQLANVSLEFEAGQFVGIVGQSGSGKSTLMKLLPRLYTPDAGRILIDRY
DISKVELYSLRQQVGIVPQDSLLFEGTIQENIALTNPEAEIERIIAAAQVACAHDFIMDL
PLGYNTRVSERGASLSGGQRQRIAIARTILQRPRLLILDEATSALDYDTERQVCLNLQAW
AGDRTVFFITHRLNTIQPADQILVMDQGAAVEQGSHEELLALKGRYYCLYQQQASAV
NT seq
2334 nt
NT seq
+upstream
nt +downstream
nt
ttggtcggcttcccccccctgactccacccacagcagagactgcagacgcagagaccaca
agcgcccccacccctgccgccttttcagaagccaccgtctataccggcgataccgtcgag
gccgacacgattcccctagcgccaccgccatccaccgacggtggagacgacgctgcagac
accaagggcaactatccccatgtgcgaggtcggggcgacattgagggcaccctggcttgc
ttcgaaatgctcagccagctgttcaacatgccctttcgtcgtgatgtcatccgtcgagtc
ttggtcacccagcagcagcgactggggcaggtatccttgcccctctgtggggccatcgcc
gaaatggttggcctccgcagccaactggtaaaactgcccgccagtgccatgccccggctg
aagacaccagccctcattacctggcaagacggcattgccatcctctacgaaaccaatcag
aaaacctatgtgatcggggatcccgaagtcggtattcgccgccgcacccccttagagttt
gaagaggtctgggggcaatccggagacgtcttgttgttggagaccaccaaggaaaccccg
cagcaacgctttgggctacagtggttccttccctacctgaagcgctatcgctgggtatta
ttagaggtcttcgtggcctcctttttcgtgcaactgttcggcctggctaaccccctgatg
gtgcaggtgatcatcgatcgagtcatcgtccagaacagcatcgacactctccatgtcttg
ggcatttttctggtggtggtggctatcttcgaggccatccttagcagcttgcgcacctat
ctgttcgtcgataccaccaaccgcatcgacatgtctctgggatcagagatcatcgatcac
ctattgcggttgcccttgcgctatttcgaccgtcgcccggtgggggaactctccagccgc
atcaacgagttggaaaatatccggcagttcctcaccggcacggccttaactgtggtgcta
gatgcggtcttctccgtcatctacatcgtggtcatgtttatttacagctggttgctcacc
ctagtggccctggccagtattcccctattcgtgctgttgacagccctggtcgcgcccatt
gtccgccgccagttacggattaaggctgagcgcaacgccgccacccaggcccacctggta
gagtccctctccggcatccagaccgttaaggcccaaaatctggaactacggacccgttgg
cgctggcaggaacgctacgcccagtacgtcagtgccggctttaataccgtcctcacctcc
accaccgctggttctgccagcaactttttgaataaactgtcggccttgctagtgttgtgg
gtaggcgcctacctagtgttgcagggagagctgaccctgggccaattaattgccttccgc
atcatctctggttacgtcaccgccccaattctgcggctggcccaactgtggcagaatttc
caggaaacagccctgtccttggagcgcctcagtgatatcatcgatcatcctcaggagaca
gacgaggccgatcgggatcaaattcccatgccccatattcagggacgggtgcagtacgaa
aatatctccttccgctttgccccctccggtcccctgcagctagccaatgtcagcttggag
ttcgaggcgggtcagtttgttggcattgtcggccagagcgggtctggcaagagtaccctg
atgaaattactaccccgactttacacccccgatgctggacggattttgattgatcgctac
gatatcagcaaggtggagctgtattccctgcggcagcaagtgggtattgtcccccaagac
agcctcctattcgagggcaccattcaagaaaacattgccctgaccaaccccgaggccgaa
atcgagcgcatcattgcagccgcccaagtcgcctgtgcccacgacttcatcatggatttg
cccctgggctataacactcgggtcagcgaacggggggccagcctatcggggggccagcga
cagcgcatcgccattgcccgcacgatcctgcagaggcctcgtctactcatcctggacgaa
gccaccagtgccctcgactatgacaccgaacgccaagtatgccttaacctgcaggcctgg
gccggggatcgcaccgtcttcttcattacccaccgcctaaacaccattcagccggcggat
cagatcctggtcatggatcagggggccgccgtagaacagggcagccatgaggagctgctg
gccctgaaaggacgctattactgcctgtaccaacaacaagccagtgccgtttaa
DBGET
integrated database retrieval system
