Halomicronema hongdechloris: XM38_023650
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Entry
XM38_023650 CDS
T04928
Name
(GenBank) tetratricopeptide repeat domain protein
Organism
hhg
Halomicronema hongdechloris
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_12
TPR_1
TPR_2
CHAT
TPR_10
TPR_8
TPR_7
TPR_16
TPR_MalT
TPR_19
SNAP
TPR_11
TPR_CcmH_CycH
TPR_6
ANAPC3
DUF3856
RPN7
TPR_NPHP3
TPR_9
ARM_TT21_C
ARM_TT21_4th
TRAPPC9-Trs120
ANAPC5
MIT
DUF7271
Motif
Other DBs
NCBI-ProteinID:
ASC71413
UniProt:
A0A1Z3HM79
LinkDB
All DBs
Position
2518684..2523297
Genome browser
AA seq
1537 aa
AA seq
DB search
MNDFEAAQLLQQGIQHFRVGQLDLAADSFREALRISKVLGNRAVEGVALTVLGNVYLNQN
KYQQAIEAQEQALALSKETGNYAGQGAALGGLGLAYLKQGQTQRGAEHLEDALPIFKQIG
DRAGECQVLSGLGNAYTQSEEYATAVKYLQQALTAAREIGNPVGEATALGGLGEVYLKQG
QYQKAIESLKPVLPIFQEMGNRPWQGETHINLAKAYDNLQQYTEAITHYEQAFNIFQDLG
DRNKVGNLLLNLGIDQGQLGQYSESASSYQRALSTFQDDGDQAGEGKALLNLGITCSYLA
QYSEGIRFLSQALSIFQHLGDLRSQGIVLERLSYTHMGSGQFTEAISFFQQGLDIVRMSC
DRLTEGTILSNLGYALTQTGEYQQALEHLNQALSIAHELENSILKGQALSFLGNLYLDQG
KYQEAIETQRYALSILRKTNNALGQAAALGCIGLAHLQQSQYQEGIKHLEEALPIFKQTR
YRFGECQTLNGLGNAYTQLQDYPSAIDYFQQALKIAKEIGNCVGEATALSGLGDAYLQHG
QYQEAIDALQSIIPILPEIGDRQLEQTIYINLGKVYTELKQFKAAIQSFEKSLKITRELG
ARIEELLALSSLSTLNFEAKRFESTIKYSRQILTLLDKKSDTELNLENEVKLNILSEAKY
NIGTAHLYKQKGIRTDNLELAIRYLKEALQGYSRDNLSSEWAKAHNNLSIAYLDRIRGGK
AENIENSIKHSKNTLEVYTIEEYPEEWARTQLNLGHAYLARILGEKVANLQESIGFCQRA
LSVFTQKESPEYWAKSQSNLGAAYATLAKQSSLKVGFLDYVKQGKPKVTSENFSNFSTSN
YEEVKHKFLEKAIESFTLALQFLDETNSPFDWAQVQMNLGAAFLDKSEIIELKEKDRLID
LAINSFDSALRVFTPIKTPEKWAEVNNHMAVAYIKRLKSETGDKAEIFSNSVVRFQDTLQ
IYTREAFPQKYAEAQHNLGRAYKYAENYSAAYDAFYEVIETLDYLRSEISPKSGIQEDKQ
KLTEAWNHVYQEMVQLCLKLDKPIEAIEYVERSKTKSLVELLTNKENYYEHETSLSRIRD
VGRISFADIQDLIDDQTAIIEWYIAERQIIAFLITRQAPHPIIWKSSSENWATWLDAYFT
YSLAYQIGKEKKKVEEGKREAQLLGEGEKEPESFLYSFYSELVKQYKKEEQWSPELENRF
GNWKQTFEHKLKNIAKALHIDELLEKIPLRCDQLIMIPNRWLHLIPLHALPISNSPEEDE
TELYLLDKFSGGIRYAPSCQLLKLSQHQARPNFEKFFAFHNPGSALAFSNLEVENICSFF
SSSQVRFRKTSTKSILDLQDGLQDSQKNHGIHEAHCVHFACHGEYNLDFPLESKLILAQD
DKANGDLTLEEIFELRLDQCRLVTLSACETGVVMEFFSNSDEYITLASGFLCAGSSSVVS
SLWTVDDLATALLMIRFYENLQTGCEVPFALNQAQQWLRNLTIKDLNKLLKKSQQSLSPT
IRMLLRQQQRQWSNQFSEDYRLFRSPYYWAAFCAIGQ
NT seq
4614 nt
NT seq
+upstream
nt +downstream
nt
atgaatgactttgaagcagctcagttactacagcaaggtattcagcatttccgggttggt
caattggatctagccgccgattcctttcgtgaagccttaaggatatccaaagttcttgga
aaccgcgctgttgagggagtagctctcactgttctgggcaatgtctaccttaaccaaaac
aaataccagcaagcgattgaagctcaggaacaagccctagcgctctccaaagagactggt
aactatgccggacagggagcagccctaggtggattaggattggcttaccttaagcaaggt
caaactcaacgaggtgctgagcatcttgaagacgcattacccatcttcaaacaaattggc
gatcgcgcgggagaatgtcaggtgttgagtgggttgggaaatgcctatacccaatcagaa
gaatatgcaaccgcagtgaagtaccttcagcaagcactaacagctgctagggaaatcggc
aatcctgtcggggaggccacagctttgggtggcttaggagaggtttaccttaagcaaggt
caatatcaaaaagccattgagtctttgaagccggtgttacccatcttccaggaaatgggc
aatcgcccatggcaaggagaaacccatattaacctggcaaaggcctacgacaatttgcag
cagtacacagaggcaattactcattatgaacaggccttcaacatttttcaagatttgggc
gatcgcaataaagtcggcaatctactgcttaatctgggcattgatcaggggcaactgggt
caatattctgagtctgcctcctcctatcaaagagctttatcaactttccaggatgacggt
gatcaagcgggagaaggaaaggctctgctgaatttgggcattacctgctcttatctggcg
caatattcagaaggaatccgtttcctgagtcaagcccttagcattttccagcatctgggt
gatctgaggagtcaaggaatcgttttagagcgtctgagctatacccacatgggatcaggc
cagttcacagaagccatcagctttttccagcaaggtttagatattgtccgaatgagttgc
gatcgcctgacagagggcacaatcctaagcaatttaggctatgcattgacgcaaacaggg
gaatatcaacaagctctcgaacatctcaaccaagctttaagtatcgctcatgaactcgaa
aactctattctcaaaggtcaagctttatcatttttaggaaatttatatcttgatcagggc
aaatatcaagaagccattgaaactcagagatatgctttatcaattctaaggaagactaac
aacgctttgggacaagccgcagctttgggttgcataggacttgcccacttgcaacaaagt
caatatcaagaaggcattaagcatcttgaggaggcgttgccaatcttcaaacaaactaga
taccgatttggagaatgccaaactttaaatggtttaggtaatgcctatactcagttacaa
gactatccaagcgccattgattatttccagcaagcactgaaaattgcgaaggaaattggt
aattgtgtaggagaagcaacagcattaagtggattaggtgatgcttatctacaacatggt
caatatcaagaagcgatcgatgctttgcagtcaataataccgattttgccagaaattggc
gatcgccagttggagcagaccatatatattaatttgggcaaagtctatactgagcttaaa
caatttaaggcagcaatccaatcctttgagaaaagcttaaaaatcactcgagaacttggt
gctcggatagaagaactgcttgccttaagtagcttaagcactctaaattttgaagctaag
agatttgagagcacaataaaatattctaggcagattttaactcttttagacaagaagagc
gatactgaattaaacctcgaaaatgaagtgaaactcaacattttgtcagaggcaaaatac
aatatcggcacagctcatctatataagcaaaaaggcataagaactgacaatttagagtta
gccattcgctatcttaaagaagccttacaaggatattctagagacaacctttcctctgag
tgggcaaaggctcataataatctttccattgcatatttggatagaattcgaggtggtaaa
gcagaaaatatagagaattcaattaagcactcaaaaaacaccttagaagtttatacaata
gaggagtaccctgaagaatgggctagaactcaacttaatttaggtcatgcttacttggca
agaatacttggtgagaaagtagctaatcttcaagaatcaatcggcttctgtcagcgagct
ttatctgtttttactcagaaggaatctcctgagtattgggcgaaatcacaaagtaacttg
ggagctgcctatgctactcttgctaagcaaagtagtcttaaggtgggtttcctagattat
gtgaagcagggtaaacctaaagtcacctcagaaaacttttccaattttagtactagcaac
tatgaagaagtaaagcataaatttttagaaaaagcaattgaaagctttacgcttgctttg
caatttctagatgagacaaactctccctttgattgggcacaggttcagatgaatttagga
gctgctttcttagataagtctgaaatcatagaattgaaagagaaagatagattgatagat
ctagccattaactcttttgactctgccctaagggtctttactcctattaagactcctgag
aagtgggcagaagtgaacaatcacatggcagttgcatatatcaagagactgaaaagtgaa
acaggagataaggctgagatttttagtaattcagttgttcgtttccaagatacgctacaa
atttatacgcgcgaggcttttcctcaaaaatatgcagaggcccaacacaatcttggacga
gcctataagtatgctgagaactacagtgcggcatacgatgcattctatgaagtcattgaa
accttagactatctgcgtagtgagataagtcccaaatcaggcatacaagaagacaagcag
aagctgacggaagcatggaaccatgtttaccaggagatggtgcagctctgtttgaagctt
gataagcctatagaggcaattgaatatgttgaacggagtaaaaccaagagtcttgttgag
cttcttacaaataaagaaaattactacgaacatgaaacatctctaagtcgaatccgtgat
gttggaaggatttcctttgctgatattcaagacctgattgacgatcaaactgcgatcatc
gaatggtatatcgcagaaagacaaattattgctttcctcattactcgccaagctcctcat
ccaattatctggaaatcttcttccgagaattgggcaacctggctagatgcttactttact
tattcacttgcttatcaaataggaaaagaaaagaaaaaagtagaagagggaaaaagagaa
gcgcagctcttaggcgaaggagagaaggaacctgaaagcttcctttatagtttttattca
gagttggtcaagcaatataagaaagaggaacagtggtcaccagagcttgaaaacaggttt
ggaaattggaaacaaacctttgagcataaacttaaaaatatcgctaaggctctacacatt
gatgagcttttagaaaaaattccgctaaggtgtgaccagttaatcatgattcccaatcgt
tggttgcatctgattccactccatgctttacctatttccaattctcctgaagaagatgag
acagaactatatcttttagataaattctcaggtggaattcgttatgcaccaagttgtcag
ttgctgaaactgagccagcatcaagctaggcctaactttgaaaagttctttgcattccat
aatccaggcagtgccctagctttttccaacttagaagttgaaaatatctgctcatttttc
tcttcttctcaagtcagatttcggaaaacatcaaccaaatctatacttgacctacaagat
ggcctgcaagattcccaaaaaaatcatggcattcatgaagctcactgtgttcactttgcc
tgtcatggcgaatataatttggactttcctttagagtcaaaactgattttggcacaggat
gataaggcaaatggagatttgaccttagaagaaatctttgagcttcgccttgatcaatgt
cgcctagtaaccctttcagcctgtgaaacaggtgttgtgatggagtttttcagtaatagt
gatgaatacattactctggcgagtggttttttatgtgcaggtagttctagtgttgttagt
agtctttggacggttgatgatctcgcaacagcattgttgatgattcgattctatgaaaac
ttacagacaggttgtgaagtaccgtttgcattgaaccaagctcagcagtggttaagaaac
ttaaccatcaaagatttaaataaattactgaaaaaatcacagcaatctttgagtccaaca
atcagaatgcttttgaggcagcagcaacgacaatggtctaatcagttttcggaggattat
cgattatttcgttctccctattattgggcagcattctgtgcgattggtcagtaa
DBGET
integrated database retrieval system
