Halomicronema hongdechloris: XM38_025020
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Entry
XM38_025020 CDS
T04928
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
hhg
Halomicronema hongdechloris
Pathway
hhg03030
DNA replication
hhg03430
Mismatch repair
hhg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hhg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
XM38_025020 (holA)
03430 Mismatch repair
XM38_025020 (holA)
03440 Homologous recombination
XM38_025020 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hhg03032
]
XM38_025020 (holA)
03400 DNA repair and recombination proteins [BR:
hhg03400
]
XM38_025020 (holA)
Enzymes [BR:
hhg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
XM38_025020 (holA)
DNA replication proteins [BR:
hhg03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
XM38_025020 (holA)
DNA repair and recombination proteins [BR:
hhg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
XM38_025020 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delta_C
Motif
Other DBs
NCBI-ProteinID:
ASC71550
UniProt:
A0A1Z3HMN1
LinkDB
All DBs
Position
complement(2651202..2652074)
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AA seq
290 aa
AA seq
DB search
MPIYFYWGDDEFRLSQAVADLCDRTLAADWASFNFDKLGPETPDAPLQALNQAMTPPFGL
GQRLVWLQDTALGQRCPEAVLQELERTLPQVPESTVLLFTSRNKPDGRAKFTKLLQRHGE
LRQFATIPPWKREQLAQQVTQMAQKIGLSLSPEATTALTTAIGNDTRQLWNELQKLAIYW
QPSTQPLPAAVVHDLVTASSQNSLQLAQALGQGQTSRALTLVNDLLNRNEPALRIVAVLV
SQFRTWLWVKLLTEAGERDARTIAQAAERWAILSAFTFCKKRYRFSPWLP
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgcccatctatttttactggggagatgatgaatttcgcctcagccaagcggtggcggac
ctgtgcgatcgcaccctagcggccgactgggccagctttaacttcgacaagctagggcca
gagacacccgatgctcccctgcaggccctgaaccaggccatgacccccccctttggcttg
ggccaacggctggtctggctgcaagataccgccctgggccaacgctgccccgaggcggtc
ttacaagagctagaacggaccctgccccaggtgcccgagtcgacggtgctgctattcacc
agccgcaacaaacccgatggccgggccaaatttaccaaactgttacagcgccatggggaa
ctccgccaatttgccaccatccccccctggaagcgtgagcaactggcccagcaggtcacc
cagatggcccagaaaattggcctcagccttagcccagaggccaccactgccctaaccact
gccatcggcaacgacacccgccagttgtggaatgagttgcagaaactggcgatttactgg
caaccgtcgacacagccattaccggcagccgtagtacacgatctcgtcaccgccagtagt
cagaacagcctgcagctggcccaggccctaggacaggggcagaccagccgggccttgacc
ctggtgaacgatctgctgaatcgcaatgaaccagccctgcggattgtggcggtcttagtc
agccaattccgcacttggctctgggtaaaactgctcaccgaggccggcgaacgcgatgct
cgcaccattgcccaggcagccgagaggtgggcaatcctaagcgcatttactttttgcaaa
aagaggtacaggttttctccctggttgccttga
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