Halomicronema hongdechloris: XM38_025780
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Entry
XM38_025780 CDS
T04928
Name
(GenBank) SpoIID-LytB domain protein
KO
K06381
stage II sporulation protein D (peptidoglycan lytic transglycosylase) [EC:
4.2.2.29
]
Organism
hhg
Halomicronema hongdechloris
Brite
KEGG Orthology (KO) [BR:
hhg00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
hhg01011
]
XM38_025780
Enzymes [BR:
hhg01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
XM38_025780
Peptidoglycan biosynthesis and degradation proteins [BR:
hhg01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
XM38_025780
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SpoIID
DUF4278
Motif
Other DBs
NCBI-ProteinID:
ASC71625
UniProt:
A0A1Z3HMX5
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All DBs
Position
complement(2731656..2732612)
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AA seq
318 aa
AA seq
DB search
MSYSSVMCRRLFQRCWQGLWLGGGTALVWSLLAVAAWAGVDLRVILSRGSQRLTVGSSGA
AVVRDRNGQTLGRVPGNQALTAAPQGAQVSLGNWQGTALWLDPGDGDYVFVGHRWYRGRV
LVMANGGGLTAINYVDLEHYLYSVLGGEMPSSWPAAALEAQAVAARSYALYHRNRAGQRP
YDVASTTASQVYRGLESEARSTRAAVDATQGQVLTYNGQIIEAVFHSSSGGYTENVEDVW
QRPVPYLRSVKDYDAGAPVYEWVETLSMAEFERRIPGIGSLVAGSTPAHDSPGAGSSPYG
CRAARAHACSVANEVRRP
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgagttattccagtgtaatgtgtcggcggttgtttcagcggtgttggcaggggctgtgg
ctggggggcggcacggccctagtctggtctctgttggccgtggccgcttgggctggggtc
gacctgcgggtcatcctcagtcgcggcagtcagcggctcactgtcggcagttctggagca
gcggtggttcgcgatcgcaacggccagaccctggggcgggtgcccggcaatcaggccctc
accgccgccccccaaggagcccaggtgagcctaggcaactggcaggggacggccctgtgg
ctcgaccctggcgatggtgactacgtcttcgtcggccatcgctggtatcggggccgagtg
ctggtaatggccaatggcggtggactcaccgccattaactatgtcgatttagaacattac
ctctacagcgtgttagggggggaaatgcccagcagctggccggcggcagccctagaggct
caagccgtcgccgcccggtcctatgccctttaccaccgcaatcgggccgggcagcggccc
tacgatgtggccagcacgacggcatcccaggtctatcggggcctagagtcggaagctcgc
agcacccgggctgcggtagatgctacccaaggacaggtgttgacctacaacggtcagatc
attgaagccgtctttcactcttcctcgggtggctacaccgaaaacgtcgaagatgtctgg
cagcggccagtaccctacctgcgcagtgttaaagactatgacgccggtgctcccgtctac
gagtgggttgaaaccttgtccatggcagagttcgaacggcggattcccggcattggcagc
ttggtggcgggcagtaccccagcgcacgactcccccggggccgggtcgtcaccctacggt
tgcagggcagcgagggcacacgcctgctcagtggcaaatgaggtgcgcaggccttga
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