Halomicronema hongdechloris: XM38_033990
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Entry
XM38_033990 CDS
T04928
Symbol
rnd
Name
(GenBank) Ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
hhg
Halomicronema hongdechloris
Brite
KEGG Orthology (KO) [BR:
hhg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hhg03016
]
XM38_033990 (rnd)
Enzymes [BR:
hhg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
XM38_033990 (rnd)
Transfer RNA biogenesis [BR:
hhg03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
XM38_033990 (rnd)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
ASC72442
UniProt:
A0A1Z3HQB0
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Position
complement(3587793..3588419)
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AA seq
208 aa
AA seq
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MDGEFQVCDRDLDEALLSRYLGSDAIAIDTETMGLLPQRDRLCLVQLSDANGHIAAVRIA
QGQTQAPRLQQLLQAAQVLKIFHFARFDLATLRYHLGIDVQPIFCTKVASKLSRTYSPKH
GLKELVREVAGIELDKTAQSSDWGNAMALSEEQLRYAANDVRYLHPLRQTLTQMLQREGR
WELAQQCFQCIPVFASLDLLQFSNVFEH
NT seq
627 nt
NT seq
+upstream
nt +downstream
nt
atggatggggagtttcaggtgtgcgatcgcgacttggatgaagccttgttgtcgcgatat
ttaggcagcgatgcgatcgcaattgacaccgaaaccatggggctgttgcctcaacgggat
cggctctgcctggtgcagttgtctgatgccaatggccatattgctgcggttcgcatcgcc
caaggccaaacccaggcgccccggctgcagcaactgctgcaggctgcccaggtgctgaag
atcttccactttgcccgcttcgacctggcgacgctgcgctatcacctgggcatcgacgtg
cagcccatcttctgcaccaaggtggccagcaaactcagccgcacctacagccccaagcac
ggcctgaaggaactggtgcgggaggtagcgggcatcgagctcgataaaaccgcccagagt
tctgactggggcaatgctatggcgctctcggaggaacaactccgctatgccgccaatgat
gtgcgctatctgcatcctctgcggcagaccctgacccagatgctgcagcgggaaggccgc
tgggaactggcccagcagtgctttcagtgcattccggtgtttgccagtttggatctgctg
cagtttagcaatgtttttgagcattaa
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