Halomicronema hongdechloris: XM38_034990
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Entry
XM38_034990 CDS
T04928
Symbol
rpoD_2
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
hhg
Halomicronema hongdechloris
Brite
KEGG Orthology (KO) [BR:
hhg00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
XM38_034990 (rpoD_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hhg03021
]
XM38_034990 (rpoD_2)
Transcription machinery [BR:
hhg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
XM38_034990 (rpoD_2)
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r4_2
Motif
Other DBs
NCBI-ProteinID:
ASC72541
UniProt:
A0A1Z3HQF2
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Position
3689352..3690470
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AA seq
372 aa
AA seq
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MTQANDLLGKLEPSNELDVLIEPDSNAGFDAQEEEEQGKAAKGKTSRRRGTSPDKKKHYT
EDSIRLYLQEIGRIRLLRAEEEIELARKIADLLELERIRDDLVDSLEREPRDDEWAEAVD
MALPAFRRRLHQGRRAKDKMVQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRAAEKF
DHEKGYKFSTYATWWIRQAITRAIADQSRTIRLPVHLYETISRIKKTTKLLSQELGRKPT
EEEIATRMEMTIEKLRFIAKSAQLPISLETPIGKEEDSRLGDFIESDGETPEDEVSKSLL
REDLESVLGTLSPRERDVLRLRYGLDDGRMKTLEEIGQIFNVTRERIRQIEAKALRKLRH
PNRNSILKEYIR
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgacccaagcgaatgacctactcggaaaacttgagcctagtaatgaactagatgtcctg
attgaaccggatagtaatgctggttttgacgctcaagaagaagaggaacagggcaaagcg
gccaaagggaaaacgagccgccgtcgtggcaccagcccagataaaaagaagcactatacc
gaagattctattcgtctttacctgcaagaaattggtcgcatccgactgctgcgtgcggaa
gaagagattgagctggctcgaaaaattgccgatttgcttgaattagagcggatccgcgat
gatctcgtcgatagcttggagcgtgagcctcgagatgatgagtgggccgaagctgtggat
atggccttgcctgccttccgtcgtcgcctgcatcagggtcgtcgcgctaaagacaaaatg
gtgcagtctaatttgcgcttggtagtgtccatcgccaagaaatacatgaaccgcggtctg
tccttccaagatctgattcaggaagggagtttaggcttgattcgggcggctgagaagttt
gaccacgaaaaggggtacaagttttctacctatgcaacctggtggatccgtcaggccatt
acccgtgcgatcgcagatcagtcccgcaccattcgactccctgtccatctatacgaaacc
atttcccgcatcaagaaaaccaccaaactcttatcccaagagctagggcgtaagccgacc
gaagaagaaatcgccactcgcatggaaatgaccatcgagaaattgcgattcattgccaaa
tcggcccaactccccatctctctggaaacccccatcggtaaagaagaagattctcgtctg
ggtgactttattgaatctgatggggaaaccccagaggatgaagtctccaagagtttgtta
cgggaagatctcgagagtgtccttggcactctcagccctcgggagcgcgatgttctacgg
ctgcgctatgggctcgatgacggtcgtatgaagacgttggaagaaatcggtcagatcttc
aacgtgactcgggagcgcattcggcagatcgaagccaaggccctacgcaagctacgccat
cccaaccgtaatagcatcctgaaggaatatattcgctag
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