Halomicronema hongdechloris: XM38_035230
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Entry
XM38_035230 CDS
T04928
Symbol
hup
Name
(GenBank) DNA-binding protein HU
KO
K03530
DNA-binding protein HU-beta
Organism
hhg
Halomicronema hongdechloris
Brite
KEGG Orthology (KO) [BR:
hhg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hhg03032
]
XM38_035230 (hup)
03036 Chromosome and associated proteins [BR:
hhg03036
]
XM38_035230 (hup)
03400 DNA repair and recombination proteins [BR:
hhg03400
]
XM38_035230 (hup)
DNA replication proteins [BR:
hhg03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
XM38_035230 (hup)
Chromosome and associated proteins [BR:
hhg03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
XM38_035230 (hup)
DNA repair and recombination proteins [BR:
hhg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
XM38_035230 (hup)
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Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_2
Transposase_mut
HU-CCDC81_bac_2
HU-DNA_bdg
Motif
Other DBs
NCBI-ProteinID:
ASC72565
UniProt:
A0A1Z3HQJ7
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All DBs
Position
3715181..3715456
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AA seq
91 aa
AA seq
DB search
MNKGELVDQVAQKASVTKKEADAVITAMIDSVMEAVANGDKVTLVGFGSFERRERKEREG
RNPKTGDTMVIPATRVPAFSAGKQFKEMVAK
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaggcgaactcgtcgatcaggtggcccaaaaagcctccgtaactaagaaagaa
gcggatgctgtcattactgccatgattgattcagtcatggaagccgtggccaatggcgac
aaagtgaccctagtcggatttgggtcttttgagcgccgtgaacgcaaagaacgagagggg
cgtaatcccaaaaccggagatactatggttatcccggcgactcgggtacctgccttttct
gccggtaagcagtttaaagagatggtggccaagtag
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