Halomicronema hongdechloris: XM38_036420
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Entry
XM38_036420 CDS
T04928
Symbol
appC_1
Name
(GenBank) Oligopeptide transport system permease protein AppC
KO
K02034
peptide/nickel transport system permease protein
Organism
hhg
Halomicronema hongdechloris
Pathway
hhg02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
hhg00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
XM38_036420 (appC_1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hhg02000
]
XM38_036420 (appC_1)
Transporters [BR:
hhg02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
XM38_036420 (appC_1)
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Gene cluster
GFIT
Motif
Pfam:
BPD_transp_1
OppC_N
Motif
Other DBs
NCBI-ProteinID:
ASC72684
UniProt:
A0A1Z3HQT4
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Position
3834092..3835228
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AA seq
378 aa
AA seq
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MTWWQKLTQNSLARVGLVILTVFYAVVIFADVVAPYDPYVNEPNGSLLPPTEIYWRQQLT
GEWIGPHVYPTTQGPVDIDTGERNVTVDYSEPSPIRLWVAGKDYHLFRLVLPLPTRWSLS
QPRFQETVLWPGIAGNRHLFGTVGPGKLHLLGTDEQARDQFSRLIFGGRISLSVGVIGII
LSFPLGLLVGGLSGYFGGAVDAILMRLVEMIMTIPDIYLLVALAAVLPPTLSSGQRFLLI
ILITSFVRWTGLARVIRGQVLSIKEQEFVQAARAMGGRSLYIITRHVLPQTATYAIIAAT
LAIPSFIVAEAILSLIGLGIQQPDPSWGNMLSNATNASILVLQPWLIWPPALLIVVTVLC
FNLLGDGLRDALDPRTLK
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atgacctggtggcagaagctgacccaaaactccctagcaagggtggggcttgtgatttta
acggtgttttacgccgtcgtgatttttgccgatgtcgtggccccctatgacccctatgtc
aacgagcccaatgggtcattgctgccgcccaccgagatctactggcggcagcaactcaca
ggcgagtggatcggtccccacgtctatcccaccacccaaggtcccgtggatatcgatacg
ggggaacgcaacgtcaccgtagactattcagaaccctccccgattcgcctctgggtagcc
gggaaagactatcacctgtttcggttggtactgccgctgcccacccgttggtccctgagc
cagcctcggtttcaagagacagtactgtggcctggcattgccggcaaccgtcacctgttt
ggcaccgtcggccctggcaagctgcacctgttggggactgacgaacaagctcgggatcag
tttagccgtctgatctttggcggtcgtatcagcctcagtgtcggggtgattgggatcatt
ttgagctttcccctagggctcttagtgggggggctctcaggctatttcggcggcgctgtg
gatgcgatcttgatgcggctggtggaaatgatcatgaccatccccgacatctatttattg
gtggctttagcggcagtgctgccccccaccctcagtagcggccaacgatttctgctgatc
atcttgattacctccttcgtgcgttggaccggattagcgcgggtgattcgggggcaggtg
ctctcgattaaggagcaggaatttgtccaggcggcgcgggccatgggcgggcgctcgctg
tacatcatcacccggcatgtattgccccaaaccgcgacctacgccatcatcgctgctact
ctggcgattccaagctttattgtggccgaggccatcttgagcttgattggtctggggatt
cagcagcccgacccctcttggggcaatatgctctccaatgccaccaatgcctcgattctg
gtgttgcagccctggttgatctggccaccggccctgttaatcgtggtgacggtgctgtgc
tttaacctgttgggggatggcctgcgggatgccctggatccccgcactctgaaataa
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