Halomicronema hongdechloris: XM38_038310
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Entry
XM38_038310 CDS
T04928
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
hhg
Halomicronema hongdechloris
Brite
KEGG Orthology (KO) [BR:
hhg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hhg03016
]
XM38_038310 (truB)
Enzymes [BR:
hhg01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
XM38_038310 (truB)
Transfer RNA biogenesis [BR:
hhg03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
XM38_038310 (truB)
Prokaryotic type
XM38_038310 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
ASC72871
UniProt:
A0A1Z3HRD3
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All DBs
Position
4044723..4045652
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AA seq
309 aa
AA seq
DB search
MTTAGFLNLNKPSGWTSHDCVGRLRRLLRTKKVGHGGTLDPAATGVLPIAVGRATQLLRF
LATDKAYHAVIRFGLTTTTDDLQGTLVEQCSATDVTLEQVTSILPRFLGSIAQVPPRYSA
IQVHGQRLYELARQGKPVEIPTRQVTVHSIEVLDWQPGEAPELTLAIACGPGTYIRALAR
DLGQVLGSGATLSALTRTRSNGFHLDDSLTLDQVERQLAENRLSLIAPAAMLTHLPAITL
TGDAARRFCHGQKLSLEQAPVAAGRPLRVLNQTNELLGIAQIRSQTSGYQLKPERVMVAP
PQGASVHQP
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgacgacagcaggatttctcaatctgaataagccgtcggggtggacctcccacgactgt
gttggccgactgcgacggttactgcggaccaagaaagtcggccatggagggacgctagat
ccagcggcaacgggggtattgcccattgctgtcggtcgggcgactcagcttttgcggttt
ctggcaaccgataaggcttatcatgcggtgatccgatttggcctgacgacgaccaccgat
gacctgcagggcacacttgtggagcagtgctcggccacagatgtcaccttagagcaagtg
acgtcgatcttgcctcggtttttgggctcaattgcgcaggtgccgccccgctatagtgcc
attcaagtgcacggacaacggctctatgagttggctcgccagggaaaacctgtggagata
cccacccgccaggtcacggtgcattccattgaagtcctggattggcagccgggggaggcg
cctgagttgacccttgcgatcgcatgtggacccggcacctacattcgcgccctggctcga
gatctggggcaagtgttaggatcaggagctaccctatcagccctgacgcgaacccgcagt
aatggctttcatctagacgatagtctcaccctagaccaagtggaacggcagctggcagag
aaccgactctcgctgatcgcaccagcggcaatgttgactcacctacccgccattacccta
accggtgatgctgcccgccgcttttgccacggacaaaaattatccctcgagcaggcacca
gtcgccgcaggaagacctttacgggtgctcaatcaaaccaatgagctgctgggtattgcc
cagatacgatcccagaccagcggataccaactgaagccagagcgggtcatggtcgcgcca
ccccagggagcatcggtacaccagccataa
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