Halomicronema hongdechloris: XM38_041060
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Entry
XM38_041060 CDS
T04928
Symbol
sbcC__2
Name
(GenBank) putative DNA double-strand break repair Rad50 ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
hhg
Halomicronema hongdechloris
Brite
KEGG Orthology (KO) [BR:
hhg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hhg03400
]
XM38_041060 (sbcC__2)
DNA repair and recombination proteins [BR:
hhg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
XM38_041060 (sbcC__2)
Archaeal homologous recombinant proteins
XM38_041060 (sbcC__2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_15
AAA_21
AAA_29
SbcC_Walker_B
Tropomyosin
ABC_tran
MukB
Motif
Other DBs
NCBI-ProteinID:
ASC73144
UniProt:
A0A1Z3HS54
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All DBs
Position
complement(4328033..4330795)
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AA seq
920 aa
AA seq
DB search
MEILSVTLTNFKTHRDRHVEFQPGTNAICGQNGAGKTSILEAIAWVLFNYQGDYAKEDLI
RNGSSSAQARVCLVSALDGRTYEVQRCTSRGYTLYDPQLQERLPYSRIKDEVMPWLRQHL
GVPAGTDLAQLFARTIGVPQGTFTADFLLPTAERKGVFDKILKVDEYQAVYKQLNGLRRY
AEAQVQALERDLAQYEEQLQAWPEWQRRHHQAQAQLQADEARLQQLTTDLTALQTQRQQL
QAEVDALQALQTQAQTLTSEMTGRERSLELLQQGLEQANRAVAICETQRSAYEAYQGAEA
TLGELNQRYQARQRLDSQHRQCQGQVTQHQAEVTRLELQLESFSRTEAELQQLQPAIEQQ
QTVETQLNQVNQQLQQLQQARLEHQAAQRQLTTLESRLTQVQQQIDALQTQQAQLQDLPE
LVQRCDRIRQHLSRLEAAQQFEADLRQLVDRHQTRHQDYRQQVEAVLTLMASLQQSLPLL
TQEAVTSLEQALETGLALNQDMLQALQEILADLQGQTDPDILTQQLTALEQQVQQRYRQQ
AAVAQLPEKQQQQQQLQADQAQLQTTLATLAETLAATAPLNQQQSDLTAALAALQDPRGQ
GQVLQRSLQQRPQVQRQYNQMQATQARLQQTLKDLERQLQAFADLDDAIEQQRQIQATHQ
AGYHQYLQHQQEAQRQPRVAAELQQAQAELTADQSQLARVQQQLQTQQQRVDPQQLAQIE
QRHRELQSQVDRLGGSLPQQRQRLQELEQQLADLKQVAARRDRTLADRKRCDRIRRFINV
ARRTYKEAGPRITERYVQQITREADRLLRDLLNRPNIALDWTRDYEIQVQEGPHRRRFLN
LSGGEQMCAALAVRLALLKVLADIDVAFFDEPTTNMDRARRESLAEAIARIKSFRQLFVI
SHDDTFEKVTENLVLVERQD
NT seq
2763 nt
NT seq
+upstream
nt +downstream
nt
atggaaattctctctgtcaccctgaccaatttcaaaacccaccgggatcgtcacgtcgag
tttcagccgggtaccaacgccatttgcggccagaatggggccggtaagaccagcattcta
gaagccattgcctgggtgctctttaattaccagggagactatgccaaggaggatttgatt
cgcaatggcagcagcagtgcccaggcccgggtgtgcttggtctcggccctggatggccgc
acctacgaggtgcagcgctgcaccagccggggctataccctctatgatccgcaattgcag
gaacggctgccctacagccgcattaaagatgaggtcatgccgtggctgcggcagcatttg
ggggtaccagcgggaaccgatctagcccagttgtttgcccgcaccattggcgtgccccag
ggcacctttacggccgatttcctgttgccgacggcggagcgcaagggggtcttcgacaag
attctcaaggtagatgagtatcaggctgtatacaagcagctgaatggcctgcggcgctat
gccgaagcccaggtgcaagccctagagcgggatctagcccagtacgaggaacagttgcag
gcttggccggagtggcagcggcgccatcaccaggcccaagcccaacttcaggccgatgag
gctaggctgcagcagctgacgactgatttgacggcgttgcagacacaacggcaacaactc
caggcggaggttgatgcgttgcaggcattgcagacccaggcccagactctgacctcagaa
atgactggacgggaacggtccttggagctattgcaacagggcctggagcaggccaatcgg
gcagtggcgatctgtgagactcagcggtcggcctatgaggcctaccagggagctgaggca
actttaggcgagctgaatcagcgctatcaggctcgacaacggttggacagccagcatcgg
cagtgtcaagggcaggtgactcagcaccaggcggaggtgacgcggttagagctgcagctg
gagtctttttctcggactgaggcggagttgcagcaactacagcctgccattgagcagcag
caaactgtggagacgcagctgaaccaggtcaatcagcagttgcaacagctgcagcaagct
cgtttggaacaccaggcggcccagcgacaattgacgaccctggagagccgcctgactcag
gtgcagcagcagatagatgccctgcagactcaacaggcacagttgcaggatttgccagag
ttggtgcagcgatgcgatcgcatccgccaacacctgagccgtctcgaggcagcccagcaa
tttgaggccgatctgcggcagttagtcgatcgccatcagacccgtcaccaggactatcgg
cagcaggtggaggccgtcttgaccctgatggcctcactgcagcagagtctaccgttgctg
acccaagaggcagtgacttccctagagcaagccttggagacggggttggccttgaatcag
gacatgctgcaggccctgcaggagattctggcggatctgcaagggcagactgaccccgac
atcttgactcagcaattgacagctctggagcagcaggtacagcaacgctatcgacagcag
gccgcggtggcccaactgcctgagaaacaacaacaacagcagcagctccaggctgaccag
gcccagctccagactaccctggctactttggcagaaaccctggctgccactgcccccttg
aaccagcagcaatcggatctgacggcggctctggctgccctgcaagatcctagggggcaa
ggccaagtgctgcagcgatccttacagcagcggcctcaggtgcagcggcagtacaaccag
atgcaggcgacccaggcgcggttacagcaaaccctcaaagacctggagcggcaattacag
gcctttgctgatttagacgatgccatagaacagcagcggcagattcaggcgactcatcag
gccggctatcatcaatatctacagcatcagcaggaggcccaacgccagcctcgggtagcg
gcggagttgcagcaggcccaagcggagttgacggctgatcagagccagttagctcgggtg
cagcagcaactgcaaactcagcagcagcgggttgacccacagcagttggcccagatcgaa
cagcgccatcgagagctgcagtctcaggtcgatcgcctcggcggcagtctgcctcagcaa
cggcagcgtctacaggagttggagcagcagcttgctgacctgaagcaggtggcggcccgc
cgcgatcgcaccctggctgatcggaagcgatgcgatcgcattcgtcgctttatcaatgtc
gcccgtcgaacctacaaagaggccgggccacgcattactgagcgttatgtccagcagatt
acccgggaagccgatcgactcttgcgagacttgttgaaccgacccaacattgccctcgat
tggacccgagattacgagattcaggtccaagaggggccccatcgccgtcgtttcttaaat
ttgtccggtggcgaacagatgtgtgctgccctggccgtacgcctagccctgctcaaagtc
ttagccgatattgatgtggctttctttgatgaacccaccaccaatatggatcgagctcga
cgagaaagcttggcggaagccatcgctcgcatcaaatccttccgccagctcttcgtgatt
agccatgacgataccttcgaaaaagtaaccgaaaacctagtactagtggaacggcaagac
tag
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