Halomicronema hongdechloris: XM38_053010
Help
Entry
XM38_053010 CDS
T04928
Symbol
truA
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
hhg
Halomicronema hongdechloris
Brite
KEGG Orthology (KO) [BR:
hhg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hhg03016
]
XM38_053010 (truA)
Enzymes [BR:
hhg01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
XM38_053010 (truA)
Transfer RNA biogenesis [BR:
hhg03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
XM38_053010 (truA)
Prokaryotic type
XM38_053010 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
ASC74326
UniProt:
A0A1Z3HVM4
LinkDB
All DBs
Position
5551865..5552737
Genome browser
AA seq
290 aa
AA seq
DB search
MASLAEQLKADTVGWTKPQRVALVIQYIGTRFHGWQRQPQQRTVQGEIEAVIEMVLGYFV
TLHGAGRTDAGVHAAAQVAHFDAPTTIPAHRWASILNHRLSADIVIRASAQVSNTWHAQF
SAQWRRYRYSLYTDPCPNLFVQPYTWHYYYEPLDVERLQAALAPLVGHHDLTAFHRAGSG
RGHSRVEVQAADCYRQESFIHVELQASGFLYGMVRLIMGLLVDVGCGSLTVDAFTQIWQR
QQRERVKYSAPAHGLCLLRVGYPEFPFASHLWFDTQPRFCFAATTDLVAV
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atggcatcgctagcagagcaacttaaagccgacacggtgggatggactaagccccaacgg
gttgctttggtcatccaatatatcggcacgcgcttccatggttggcaacgacagccccag
caacggactgttcaaggagagattgaggctgtcattgagatggtcttaggttacttcgtt
accctacacggagctggtcgtactgatgctggtgttcatgccgctgctcaggttgcccat
tttgatgccccgacaaccattccagcccatcgttgggctagcatcctaaatcaccgcctc
tcggcagatattgtgattcgggcatcagcccaagtgtctaatacctggcacgctcagttt
tcagctcagtggcggcggtatcgctacagcctatacacagatccctgtccaaacttgttt
gtgcagccctatacctggcactattattatgagccgctagatgtagaacggctgcaagcg
gctctggcccctttggtggggcaccacgatctcacagcctttcatcgagccggttccggt
cggggacactcccgggtcgaggtgcaggcagcagattgctatcgtcaggaatcgtttatc
catgtagagttgcaagctagcggttttttgtatggcatggttcgactcatcatgggactt
ctggtagatgttggttgtggcagtctcacggtcgatgcatttactcaaatctggcaacga
cagcaacgagaacgggtaaagtactctgctccagctcatggtctatgtttactacgagtg
ggctacccagagtttccctttgcctcccatctgtggtttgatacacaaccacgattctgt
tttgccgccactaccgatttagttgccgtctaa
DBGET
integrated database retrieval system
