Halomonas hydrothermalis: CLM76_00410
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Entry
CLM76_00410 CDS
T05117
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
hhh
Halomonas hydrothermalis
Pathway
hhh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hhh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CLM76_00410 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hhh03400
]
CLM76_00410 (recC)
Enzymes [BR:
hhh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
CLM76_00410 (recC)
DNA repair and recombination proteins [BR:
hhh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CLM76_00410 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
ATH76161
LinkDB
All DBs
Position
80031..83594
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AA seq
1187 aa
AA seq
DB search
MPANALLSPTSLTPGFMVVHANRLEDLRGLAVEWMRRHPLGPLENETILVQSNGIGQWLK
LALAEDPGNGGAGIAAALDVMLPARFLWQAYRRVLTHVSHDADAVPETSPFDKSRLVWRL
LRLLPTLAGQPVFEPLAQFLQTDRDQRKHYQLAERLADLFDQYQVYRADWLDAWANGHDV
LITARGEHRPLEEHQCWQPALWRILRDDVAATQGDAGLNSSRAQVHQRFLKATEQLEGQA
CPPGLPRRLIIFGISSLPQQTLEALAALSRCCQIVLCVHNPCQFYWADIIEHKDLLRAQR
YRQRRKTGMPDTLDVLGTGDADDALHLHAQPLLAAWGKQGRDYLRLLDEHDDAGNYQTLF
EQQALRIDMFEPFSGEERHCLLSQLQDDIRELRPVAETQAQWPALSATDDSIVFHIAHGP
QREVEILHDQLLATFSADPALRPRDIIVMVPDIDRYAPHIEAVFGQLPTDDPRHIPYTLS
DQASRHRLPLMIALEKLLRLPELRLTVSDVLDLLEVPALRQRFGLEERDLPVLERWMEGA
GIRWGLNAQQRQRLELPSGLSQNTWAFGLRRLLLGYTVGDGHAWQGIEPFDDIGGLEASL
AGPLATLLEKLDATWETFCQPTDAATWVARLRALLETFFLTDDAQESIMLTKLENGLQQM
LESSQEAELDDPLPLSMVREHWLAQIDEHSLSQRFLAGAVNFATLMPMRAIPFKRVCLLG
MNDGDYPRSQPPLDFDLMGSDYRPGDRSRREDDRYLFLEALLSARDQLYISWMGRSQIDN
SPLPPSVLVGQLRDHLEAGWQTHTGAPLLERLTTEHPLQPFSRAYFNHPAGRLFTYAHEW
REVHAPRRPPAVERMLPAPENAPTSLSLAQLGGFLREPVRSFFNTRLGVYFEQETIAELD
AEPFALDGLQNWQLQDQLIAAQRHAVDHGQPRIEALHDALERFQGQGVLAMGAFGERMRD
ALADPMEELFNAYEEALTAWPHALPDAQVQFEAHGLTLEEPLGELRQDEAGQRCRLLLLS
SSLISQGSGRGQYRWSHLLRPWVAHLAGNLSGPMTTLLLSKAGHVTLEPVAADTARQHLE
TQLAAWQAGLQTPLPLAPQAGFAWLAKQGTPEIAQEKGRDSDAFAAAEAAYEGGYKVTGE
AAQSAYLSHQWPRFERLFFEQANGHTFATLTESLYAPLFFAVKGKKE
NT seq
3564 nt
NT seq
+upstream
nt +downstream
nt
atgcctgccaatgccctgctctcccccacttcgctcacccccgggttcatggtggtacac
gccaatcggctggaggacttgcgggggctggcggtggagtggatgcggcggcacccgctg
gggccgctggagaacgaaaccattctggtccagagcaacggcattgggcagtggctgaag
cttgccttggcggaagaccccggcaacggcggcgcgggtattgcagcggcgctggacgtg
atgctgcccgcgcggtttttatggcaggcctaccgccgggtgctcacccacgtttcccac
gatgccgacgccgtgccggaaacctcgccgttcgataaatcgcgcctggtgtggcggctg
ctgcggctgctgcccaccctggccgggcagccggtgttcgaaccactggcgcagtttctg
caaaccgaccgcgaccagcgcaagcactaccagctggccgagcggctggcggatctcttc
gaccagtaccaggtgtaccgcgccgactggctggacgcctgggccaacggccacgatgtg
ctgattaccgcccgaggcgaacaccgcccgctggaagagcaccagtgctggcagcctgcg
ctatggcgcatcctgcgtgacgatgtggccgccacccaaggcgatgccgggctgaacagc
agccgcgcccaggtacaccagcgctttttgaaagccaccgaacagctggaaggccaggcc
tgcccgccggggctgccccgtcggctgatcattttcggtatttcgtcgctgcctcagcaa
accctggaagcgctggcggcgctctcccgctgctgccagatcgtgctgtgcgtgcacaac
ccctgccagttctactgggcggacatcatcgaacacaaagacctgctgcgcgcccagcgc
tatcgccagcggcgcaagaccggcatgcccgacacgctggacgtgctgggcaccggcgat
gccgatgacgccctgcacctgcacgcccagccgctgctggccgcctggggcaagcagggc
cgcgactatctacggctgctcgatgagcacgacgatgcgggcaactaccaaacgcttttc
gagcagcaggcgctgcgcatcgatatgttcgagccgttcagcggcgaggagcgccactgc
ctgctcagccagctgcaagacgatatccgcgagctgcgcccggtggcagaaacccaagcc
cagtggccagcgctgtccgccaccgatgactccatcgtgtttcatattgcccacggcccc
cagcgtgaggtggagattctccacgaccagctgctggccaccttcagcgccgaccccgcc
ctgcgtccgcgcgatatcatcgtcatggtgccggacatcgaccgctacgccccgcacatc
gaagcggtatttggccagctgcccacggacgacccgcggcatattccctatacgctctcc
gaccaggccagccgccaccgcctgccgctgatgatcgcgctggaaaaactgctgcgcctg
ccagagctgcgcctgacggtcagcgatgtgctcgacctgctggaagtgcccgccctgcgc
cagcgctttggcctggaagagcgcgacctgccggtgctggagcgctggatggaaggcgcg
ggcatccgctgggggctgaacgcccagcaacgccagcggctggagctgcccagcgggctg
agccagaacacctgggccttcggcctgcgccgcctgctgctgggctacaccgtgggcgac
ggccacgcctggcaaggcatcgagcccttcgatgatattggcggcttggaagcgagcctg
gcagggccgctggccacgctgctggaaaaactcgacgccacttgggaaaccttctgccaa
cccaccgatgccgccacctgggtggcgcggctgcgggcactgctggaaaccttcttcctc
accgacgatgcccaggaaagcatcatgctcaccaagctggaaaacggcttgcagcagatg
ctggaaagcagccaggaagcagaactcgacgacccgctgccgctctccatggtgcgcgaa
cactggctggcacaaatcgatgaacacagcctttcccagcgctttttggccggagcggtc
aacttcgccaccctgatgcccatgcgcgccatccccttcaagcgggtgtgcctgctgggc
atgaacgacggcgactacccccgctcccagccaccgctggatttcgacctgatgggcagc
gactaccgtcccggcgaccgctcccgccgggaagacgaccgctacctgtttctcgaagcg
ctgctctccgcccgggaccagctttacatcagctggatgggccgcagccagatcgacaac
tccccgctgcccccctcggtactggtgggccaactgcgcgatcacctggaggctggctgg
caaacgcacaccggcgcgccgctgctggaaagactcaccaccgaacacccgctgcagccg
ttcagccgcgcttacttcaaccacccggcgggccgcctgttcacctacgcccacgaatgg
cgggaagtgcacgccccccgcaggccgcctgcggtggagcgcatgctacccgcgccggaa
aacgcccccaccagcctctcgctggcccagttgggcggctttctgcgcgagccggtgcgc
agcttcttcaatacccggctgggggtctatttcgagcaggagacaatcgccgagctggac
gccgagcccttcgcgctggatggcctgcaaaactggcagctccaggaccagctgattgcc
gcccagcgccacgcggtggatcacggccaaccgcgtatcgaggcgctgcacgacgcgttg
gagcgctttcaaggccaaggggtactggccatgggtgccttcggcgagcgcatgcgcgat
gccctcgccgaccccatggaagagttgttcaacgcctacgaagaagcgctcacggcgtgg
ccgcacgcgctgccagacgcacaggtgcagttcgaggcccacggcctcacgttggaagaa
cccctgggcgagctgcgccaggatgaggcaggccagcgctgccgcctgctgctgctcagc
agcagcctgatcagccagggcagcgggcgcggccagtaccgctggagccacctgctgcgc
ccttgggttgcccacctggcaggcaacctcagcggcccgatgaccaccctgctactttcc
aaagccgggcatgtcacgctggaacccgtggccgccgacaccgcccgccagcacctggaa
acgcagctcgccgcctggcaagcgggcctgcaaaccccgctgccgctggccccacaggcc
ggttttgcctggctggccaagcaaggcacgccggagatagcgcaggagaaaggccgagac
agcgacgcttttgctgccgccgaagccgcctatgaagggggttacaaggtcaccggcgaa
gccgcgcaaagcgcgtacttgagccaccagtggccccgcttcgagcggctgtttttcgag
caggccaacgggcacacttttgccacactgaccgaatcactttacgcgccgctctttttc
gctgttaagggcaaaaaggagtaa
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