Vreelandella venusta Y2: CLM76_01235
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Entry
CLM76_01235 CDS
T05117
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
hhh
Vreelandella venusta Y2
Pathway
hhh00300
Lysine biosynthesis
hhh00470
D-Amino acid metabolism
hhh01100
Metabolic pathways
hhh01110
Biosynthesis of secondary metabolites
hhh01120
Microbial metabolism in diverse environments
hhh01230
Biosynthesis of amino acids
Module
hhh_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
hhh00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
CLM76_01235
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
CLM76_01235
Enzymes [BR:
hhh01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
CLM76_01235
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
ATH76312
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Position
complement(267541..268800)
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AA seq
419 aa
AA seq
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MDKYTLLPEHVRSAIAQHRKQSRDPIAAFFYDLPALAAHGRSMKAALPPGVELFYAIKAN
SEAAIIDTLAPIVDGLELSSGGEIERACNSVTPRPWVMSGPGKLDSDMRCAMQQGIEAFH
IESLSEIDRLQRVAAELNRIQPVLLRINPVLPAAFSSRLKMAGAATPFGIDEAQLSAAVS
AVDDAPNLSLRGFHSHAMSHQIEVRRHQQLLAFYLERWPQWRALARDPEQLTQLNVGGGI
GVNYLQPSQQFDWQGLCQALGEHLSAMQAPPLVRFEIGRYLSAFCGYYAIEVLDTKVSHG
EGFLVCRGGTHQFRLPVAQGHDHPVIHLPEDSCRASRGENRSWTVVGQLCTPKDVLSRHQ
MMRGVAVGDLLVLPLAGAYGYNISHADFLCHPRPEQHFIEHSSTAASASADTHTICAQL
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atggataagtacaccctgctacctgagcatgttcgctcggcgatagcgcagcaccgcaag
cagtctcgtgatcccattgccgcatttttttacgacctgccagccctggctgcccatggc
cggagtatgaaggcggcattaccccctggggtcgaacttttttatgccatcaaggcgaat
agtgaagctgcgattatcgatacgttggctcccatcgtggatggactggagctgtcctca
ggcggggagatcgagcgggcttgcaacagcgtcacgcctcggccatgggtaatgtcgggg
ccgggcaagctggattcggacatgcgatgtgcgatgcaacagggcatagaggcgtttcat
attgaaagcctgagcgaaattgatcgtttgcagagggtagcggcggaattgaatcgcata
cagccggtactactgcgtatcaatcctgttctgcccgccgccttctccagtcggttgaag
atggcgggggcggcaacgccctttggcattgatgaagcgcagttatccgctgcggtcagc
gctgtcgatgacgcccctaacctctcgttgagaggctttcacagtcatgccatgtcacat
caaatcgaggtacgtcgccatcagcagctattggcgttctacctggaacgctggccacag
tggcgagcactggcgcgtgatccagagcaactgacacagctcaacgtcggcgggggcatt
ggcgtcaattatctccagccttcgcaacagttcgattggcaagggctgtgccaagctttg
ggagagcacctgagtgccatgcaggcgcctccgttggtgcgcttcgaaatcggacgttac
ctctcggcgttctgtggctactacgccatcgaggtgctggataccaaggtcagtcatggt
gaagggtttctggtgtgtcgcgggggaacgcatcagtttcgtctacccgtggctcagggg
cacgaccatccggtcattcacttgcccgaggactcctgtcgtgcgagcagaggcgagaac
cgctcgtggacggtcgtgggccaactatgcacgccaaaggatgtgttgagccgccaccaa
atgatgcgtggtgtcgcggtcggagatctgttggtactgccccttgctggcgcttatggc
tacaacatctctcatgccgattttctttgtcacccccggccggagcagcacttcattgaa
cactcttcgacggcggcttccgcctctgccgacacgcacacgatttgcgcgcagctgtga
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