Halomonas hydrothermalis: CLM76_01560
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Entry
CLM76_01560 CDS
T05117
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
hhh
Halomonas hydrothermalis
Brite
KEGG Orthology (KO) [BR:
hhh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hhh03016
]
CLM76_01560
Enzymes [BR:
hhh01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
CLM76_01560
Transfer RNA biogenesis [BR:
hhh03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CLM76_01560
Prokaryotic type
CLM76_01560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
TPR_27
Motif
Other DBs
NCBI-ProteinID:
ATH76373
LinkDB
All DBs
Position
complement(347460..348500)
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AA seq
346 aa
AA seq
DB search
MLELPDWQRSLTADFGPPAPGHYRTAPEDFRVDEQLDFIPEGQGEHLWLRVEKRNLTTLE
VVRQLSRLCSVGQRDIGYSGMKDRVAVTRQWLSVHLPGRQAPEGLAGALAELGIQVLEQA
RHPRKLKRGVHRTNHFQLRLSGDAVQREDFTARWEALCRHGVPNYFGHQRFGAGARNLQR
AQAVLAKGWRKRDDRQGMMLSTARSFLFNELLSVRLQEGSWCCPLAGDTLMLEGTQSVFA
VDSVDEALIERAAAMDLHPTGVLWGVGELAQGAAAKYETLLRQRHPALCEGLEKSGVKRA
QRALRACLISPSITHEDNAVLLSFALPRGSFATAVIGELIHHPDTA
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgcttgaacttcctgattggcagcgcagcctgacggccgatttcggcccgcccgcccca
ggccactaccgcaccgcgccggaagattttcgggtcgacgagcagctcgacttcatcccc
gaagggcagggcgagcatctctggctgcgggtggagaagcgcaacctgaccacgctggag
gtggtcagacagctcagccgactatgcagcgtgggacagcgcgacatcggctactcagga
atgaaagaccgggtcgccgtcacgcggcagtggctcagcgtacatctgccggggcgccaa
gcgcctgaagggctggcaggtgccctggccgagctgggcattcaggtgctggagcaggcg
cgccacccgcgcaagctgaagcgcggcgtgcaccgcaccaaccattttcaactgcggctc
agtggcgacgccgtgcagcgggaagactttaccgcgcgctgggaagcactgtgccgtcac
ggcgtacccaactattttggccatcagcgctttggcgcgggtgcccgcaacttgcagcga
gcccaggcggtgctggccaagggttggcgcaaacgcgatgaccgccagggcatgatgctc
tccaccgcccgcagctttctgttcaacgaactgctcagcgtgcgcttgcaggagggcagt
tggtgctgcccgttggcaggcgacacgctgatgctggaaggcacccagagcgtgtttgcc
gtcgattcagtggatgaggcgctgatcgagcgggccgccgcgatggaccttcaccccacc
ggggtgttgtggggcgttggtgaattggcgcagggggcggcggcgaagtatgaaactctg
cttcgacagcggcatccagcgctgtgtgaagggcttgaaaaaagtggcgtcaagcgagcc
cagcgggccctgcgcgcctgcctgatatcacccagcatcacccatgaagacaacgctgtg
ctactctcgtttgccctgccgcgaggcagctttgccacggcggtgatcggcgagttgatc
caccaccccgacaccgcctga
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