Vreelandella venusta Y2: CLM76_01900
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Entry
CLM76_01900 CDS
T05117
Name
(GenBank) long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
hhh
Vreelandella venusta Y2
Pathway
hhh00061
Fatty acid biosynthesis
hhh00071
Fatty acid degradation
hhh01100
Metabolic pathways
hhh01212
Fatty acid metabolism
hhh02024
Quorum sensing
hhh04146
Peroxisome
Module
hhh_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
hhh00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
CLM76_01900
00071 Fatty acid degradation
CLM76_01900
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
CLM76_01900
09145 Cellular community - prokaryotes
02024 Quorum sensing
CLM76_01900
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
hhh01004
]
CLM76_01900
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hhh04147
]
CLM76_01900
Enzymes [BR:
hhh01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
CLM76_01900
Lipid biosynthesis proteins [BR:
hhh01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
CLM76_01900
Exosome [BR:
hhh04147
]
Exosomal proteins
Exosomal proteins of breast milk
CLM76_01900
Exosomal proteins of breast cancer cells
CLM76_01900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Tad8
Motif
Other DBs
NCBI-ProteinID:
ATH76439
LinkDB
All DBs
Position
complement(422241..423992)
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AA seq
583 aa
AA seq
DB search
MSNDHFYDSAPWAHLYGTNHHAIGDLPQPRFASIPAMVTAAAQQFGSHTAFTTCMPNGMN
GTLAYRQTDTLSDAFAVYLRDTLGLAKGDRVAVQMPNCLALPVAIFGVLKAGCVLVNVNP
LYTRREMEHQFNDAGVKTLVIMDMFADKLEDVLPNTGIQHVVLTSLSQWFSPVVRTVLDA
VLKYWNKAIPQHSLNAVTLSQAIQTGSARQAEQGIDVARYWQAIAREDTALLQYTGGTTG
VSKGAELTHGNLLSNLEQVDLVVGSHIEVGKECVLTALPIYHIFAFTVNLLAFYSKGAHN
VLVPSPRPIQNCQRAFDNYAISWISGVNTLFNALLNEEWFTVYPPKNMKVAMAGGTALHK
SVAERWRAVVGTPIAEGYGLTESSPVICFNPIGHERANSIGIPAPFTQVRIVDEQGVTVA
PGEPGEIIARGPQIMKGYWNNPEETAKTLKGGWLYTGDVGTMSEDGHFQIVDRKKDMILV
SGFNVYPNEVEDSIARLPQVQESAVIGVPDDQTGEAVHAYVVLREQGLSAKDVIRHCKTE
LAAYKVPKKVVFWDELPKTPVGKVLRKEVRAIVQGSHAETKQQ
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaatgatcacttctatgacagcgcgccgtgggcacatctttatggcaccaaccat
cacgcaataggtgacctgccgcagccgcgctttgccagtattcccgcgatggtcactgcg
gcagcccagcagtttggctcccacaccgcgttcaccacctgcatgcccaacggcatgaat
ggcacgcttgcttatcggcaaacggatactctctccgatgcgtttgcggtttacctgcgt
gacaccctggggcttgccaaaggcgaccgcgttgcggtgcaaatgcccaactgtctcgcg
cttccggtggccattttcggcgttttgaaagcgggctgtgtgctggtgaacgtcaatccg
ctctatacgcgtcgagaaatggagcatcagttcaacgatgctggcgtcaagacgcttgtc
atcatggatatgtttgccgacaagctggaggacgtgctccccaacactggcattcagcac
gtcgtactcacttcgctttcgcaatggttttcaccagtcgtgcgcacggtattggatgcc
gtactgaaatattggaacaaagccatcccccaacactcgctgaacgccgtgacgctgagc
caggccattcaaacgggcagtgcacggcaagccgaacaaggcattgacgtggcgcgctac
tggcaggctatcgcgcgtgaagacaccgcgctgctgcagtacaccggcggcaccaccggc
gtcagtaaaggggcagagctgacgcacggcaatctgctgagcaatttagaacaggtcgat
ctggtggttggcagccacatagaggttggcaaagagtgcgttctcaccgcgctgcccatc
taccatattttcgcgtttacggtgaacctgctggcgttctacagcaaaggggcgcacaac
gtcctcgtgcccagcccgcggcctatccagaattgccagcgcgcttttgataactacgcg
atctcctggatttcaggcgtcaatacgctgttcaacgcgctgctcaacgaagagtggttc
accgtgtacccgcctaaaaacatgaaagtggcgatggcgggcggcaccgcgctacataaa
tccgtcgctgagcgctggcgcgcggtggtcggcacaccgattgccgaaggctacgggcta
acagaaagctctccggtgatctgcttcaacccgattgggcatgagcgtgctaacagcatc
ggcattcccgcgccgtttacacaggtgcgcatcgtcgatgaacagggcgtgacggttgcc
ccgggcgagcctggcgagattatcgcgcgcggcccacaaatcatgaaaggttactggaac
aacccggaagagaccgccaaaacgttaaaaggtggctggctttacaccggcgatgtggga
accatgtcagaggatggtcactttcaaatcgtcgaccgtaaaaaagatatgattctggtc
agtggatttaacgtttaccccaacgaagtagaagacagcattgcgcgcttacctcaagtg
caagagtccgccgtcattggtgtccccgacgatcagacaggcgaagcggttcacgcctac
gtcgtgctgcgtgaacaggggttaagcgccaaggacgttatccggcactgtaaaacagag
cttgccgcctacaaggttcccaaaaaagtggtgttctgggatgagctgcccaaaacccct
gttggcaaggtgctgcgcaaagaagtgcgtgccatcgtgcagggcagtcacgccgagact
aaacaacaataa
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