Halomonas hydrothermalis: CLM76_02820
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Entry
CLM76_02820 CDS
T05117
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
hhh
Halomonas hydrothermalis
Pathway
hhh03030
DNA replication
hhh03410
Base excision repair
hhh03420
Nucleotide excision repair
hhh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hhh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CLM76_02820
03410 Base excision repair
CLM76_02820
03420 Nucleotide excision repair
CLM76_02820
03440 Homologous recombination
CLM76_02820
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hhh03032
]
CLM76_02820
03400 DNA repair and recombination proteins [BR:
hhh03400
]
CLM76_02820
Enzymes [BR:
hhh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CLM76_02820
DNA replication proteins [BR:
hhh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
CLM76_02820
DNA repair and recombination proteins [BR:
hhh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
CLM76_02820
NER (nucleotide excision repair)
GGR (global genome repair) factors
CLM76_02820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
Motif
Other DBs
NCBI-ProteinID:
ATH76609
LinkDB
All DBs
Position
complement(619519..622284)
Genome browser
AA seq
921 aa
AA seq
DB search
MARAPIVLVDGSSYLYRAFHALPPLTNSNGQPTGAVKGVLNMLKRLIKDYPDSPMAVVFD
APGKTFRDDMYSEYKSHRPPMPDDLRSQIEPLHACVKALGLPLLCIEGVEADDVIGTLAH
HATQAGRDAVISTGDKDMAQLVNRHITLVNTMKEETLDEAGVEEKFGLPPALIIDFLALM
GDKVDNIPGVPGVGEKTAIGLLQGMGGGLETIYGDLERVTTLGFRGAKTLPKKLEEHREQ
AFLSYRLATIKVDCDLPVGLDDLEIAHPDREALVALYKEMEFKQWLAELLEGKDEGVDDV
SGGQPAPQAEQVASGTAPGPRHDHVITEQVELDAWLERLRSVERFCFDLETTSLNYMDAE
IVGVGLALEPGEAAYIPLAHDYLDAPAQLDRRSVLEALKPLLEDPGKTKIGQNLKYDISV
LANVDIHVTGPFADTMLASYVLNSTATRHDMDSLALKYLGEKTISFEEIAGKGAKQLTFN
QIALEQAAPYACEDVDITLRLQQTLRPQVEQEGRLAEVLDHLELPLIKVLSRIERNGVAL
DAERLHQQSQQLEQRIRELESEAFELAGREFNLGSPKQLGQILFEEQKIPVIKKTPKGAP
STAEAVLEELALDYPLPKVIMQHRGLAKLKSTYTDKLPRLLNKKTGRVHTSYHQAVTATG
RLSSSDPNLQNIPIRTEEGRKIRQAFVARPGYRIVAADYSQIELRIMAHLSEDKGLLEAF
EQGRDIHTATAAEVFGTALDKVTADQRRSAKAINFGLIYGMSAWGLSRQLHLERQQAQTY
IDRYFDRYPGVARYMDRIRSQAADNGFVETVMGRRLYLPEIHSQNRNRRQGAERTAINAP
MQGTAADIIKQAMIDVDAWLAEGAFDALMVMQVHDELVFEVAEAQVDAFIEEVSARMQSA
ATLSVPLIVEAQSGANWDEAH
NT seq
2766 nt
NT seq
+upstream
nt +downstream
nt
atggcccgtgcccctatcgtgctagttgatggctcttcgtacctttaccgtgcgttccac
gcgctgccgccgctgacgaactccaacggccagcccacgggcgccgtgaaaggcgtgctg
aacatgctcaagcggctgatcaaggactaccccgatagccccatggcggtggtcttcgat
gcgccaggcaagacgtttcgcgacgacatgtacagcgagtacaagtcccaccgcccgccg
atgcccgatgacctgcgtagccagatcgaaccgctacacgcctgcgtgaaagcgctgggg
ctgccgctgctgtgcatcgaaggcgtcgaagccgacgatgtcatcggcacgctggcgcat
cacgccacccaggccgggcgcgacgcggtgatctccaccggcgacaaggacatggcccag
ctggtgaaccgccatatcacgctggtcaataccatgaaggaagagaccttggatgaggcc
ggtgtcgaggagaagtttgggctgccgcctgcgctgatcatcgacttccttgcgctgatg
ggcgacaaggtggacaacattcctggcgtgcccggcgtaggagaaaaaaccgccattggc
ctgctgcaaggcatgggtggcgggctggagaccatctatggcgacctggaacgggtcacc
acgctgggctttcgaggagccaagacactccccaagaaactggaagagcaccgcgaacag
gcgtttctctcctatcggctggccaccatcaaggtcgactgcgacctgcccgtagggctg
gacgacctggaaatcgcccacccggatcgggaagcgctggtggcgctctacaaggagatg
gagttcaagcagtggctggcggagctgctggagggcaaggacgagggcgtggacgacgtc
agcggcggccagccagccccgcaggccgagcaggtggcgtcgggcaccgcccctggccca
cgccacgaccacgtgatcaccgagcaggtcgagctggacgcgtggcttgagcggctgcgc
agcgtcgagcgcttctgcttcgacctggaaaccaccagcctcaactacatggatgccgag
atcgtcggggttggcctggcgctggagcccggtgaagcggcctatatcccgctggcccac
gactatctggatgcgcctgcccagctcgaccgccgcagcgttctcgaggcgctcaagccg
ctgctggaagatcccggcaaaaccaagatcggccagaatctcaagtacgatatttccgta
ttggccaatgtggatattcacgtcacggggccgtttgccgataccatgctggcgtcctac
gtgctcaactccaccgcgacccgccacgacatggactcgttggccctcaagtacctgggg
gaaaagaccatctccttcgaggagattgccgggaaaggcgccaagcagctcaccttcaac
cagatagctctggaacaggccgcgccctacgcctgcgaagacgtggacattaccctgcgc
ctgcagcagacgctgcgcccgcaggtcgagcaggaaggccgcctggccgaggtgctcgat
catctggagctgccgctgatcaaggtgctgtcgcggatcgagcgtaacggggtggcgctg
gatgccgagcgcctgcaccagcagagccagcagctggagcagcgtattcgcgagcttgaa
agtgaagccttcgagctggcgggccgcgagttcaatctggggtcccccaagcagctgggc
cagattctgttcgaagagcagaagattccggtcatcaagaaaacgcccaagggcgcgcct
tccaccgccgaagccgtgctggaagagctggcgctggactaccccttgcccaaggtgatc
atgcagcaccgtggcctggccaagctgaagtccacctataccgacaagctgccgcgcctg
ttgaacaagaaaactggccgcgtgcacaccagctatcaccaggcggtgaccgccaccggg
cggctctcctcgtcggacccgaacctgcagaacatcccgatccgtaccgaagaggggcgc
aagattcgccaggccttcgtggcccgccccgggtatcgcatcgtggccgcggactactcg
cagatcgagctgcgcatcatggcccacctgtcggaagacaaggggctgctggaagccttc
gaacagggccgcgacattcataccgccaccgccgccgaagtgtttggcaccgcgctggac
aaggtcaccgccgaccagcgccgcagtgccaaggcgatcaacttcggtctgatctatggc
atgagcgcctgggggctgtcgcgtcagctgcatctcgaacgccagcaggcgcagacctac
atcgaccgctacttcgaccgttaccctggcgttgcccgctacatggaccgcattcgcagt
caggccgccgacaacggcttcgtcgagaccgtcatggggcggcggctctacctgcccgag
atccactcgcagaaccgcaaccgccgtcagggggccgagcgcaccgcaatcaacgcgccc
atgcagggcacggcggcagacatcatcaagcaggcgatgatcgacgtggacgcgtggctg
gcggaaggcgcgttcgatgccctgatggtcatgcaggtgcacgacgaactggtgttcgag
gtggctgaagctcaggtagacgcgttcatcgaggaggtcagtgcacggatgcagtcggcg
gccacactgagcgtgccgctgatcgtggaagcccagagcggcgctaactgggacgaagca
cactaa
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