KEGG   Vreelandella venusta Y2: CLM76_03335
Entry
CLM76_03335       CDS       T05117                                 
Name
(GenBank) signal recognition particle protein
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
hhh  Vreelandella venusta Y2
Pathway
hhh02024  Quorum sensing
hhh03060  Protein export
hhh03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:hhh00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    CLM76_03335
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    CLM76_03335
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    CLM76_03335
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:hhh02044]
    CLM76_03335
Enzymes [BR:hhh01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     CLM76_03335
Secretion system [BR:hhh02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   CLM76_03335
  Eukaryotic Sec-SRP protein
   CLM76_03335
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N CbiA Zeta_toxin AAA_22 cobW AAA_16 NAT10_TcmA_helicase AAA_33 ArsA_ATPase AAA_30 nSTAND3 KTI12 YqeC AAA_14 nSTAND_NTPase5 AAA_31 APS_kinase MMR_HSR1 6PF2K ResIII Thymidylate_kin KAP_NTPase ParA DnaB_C AAA_17 DUF7890 TctA AAA_28 NACHT ScmC SLFN-g3_helicase TsaE AAA_19
Other DBs
NCBI-ProteinID: ATH76694
LinkDB
Position
complement(731695..733122)
AA seq 475 aa
MFQNLSERLSQTLKSIKGQARLTDDNIKDTLREVRKALLEADVALPVVKAFIERVRERAV
GQEVSKSLSPGQQFVKIVQQELEAIMGEANEGLSLKGSPAVVLMAGLQGAGKTTSVAKLA
RYLREREKKKVLVVSADVYRPAAIDQLETLAKEVQVDFYPSRSDEKPVDIATAAIKHAKI
QFHDVVLVDTAGRLAIDDAMMAEIQALHKAIAPQETLFVVDAMTGQDAVNTAKAFHEALP
LTGVILTKADGDARGGAALSVRHVTGKPIKFMGVGEKVDALEPFHPDRVASRILGMGDML
SLIEEAERTVDKDKAAKLASKVKKGDGFDLEDFRDQLQQLKKMGGMGGLLGKLPGMGQMA
EMAQGPGPEKELGKLEALINSMTPKERRKPDIINGSRKRRIAAGAGLQVPDLNRLLKQHK
QMQKMMKKAGQKGGMQKMMRGMSGLMGGKGPGGPGGPGGMGGMGGMGGPGGLPWR
NT seq 1428 nt   +upstreamnt  +downstreamnt
atgtttcagaatttgagcgagcgtctatcccagacgctgaagtctatcaagggtcaggcg
cgcctgaccgacgacaacatcaaagacacgctgcgagaagtgcgcaaggcattgctcgaa
gccgacgtggcgctacccgtggtcaaggcgttcatcgagcgggtgcgtgaacgtgcggta
ggccaggaagtctccaagagcctgtcgccgggtcagcagttcgtcaagatcgtccagcag
gagctggaagccatcatgggcgaggccaatgaaggtctctccctgaaaggctctcctgcc
gtggtgctgatggccggtttgcagggcgcgggcaagaccacctcggtggccaagctggcc
cgttacctgcgcgagcgcgaaaagaagaaagtgctggtggtttcggcagacgtctaccgc
cctgcggccatcgaccagctggaaaccctggccaaagaggtgcaggtcgacttctatcca
tcgcgctccgacgagaagccggtcgatatcgccacggcagccatcaagcatgccaagatc
cagttccatgacgtcgtactggtagataccgctggccgcctggccatcgacgacgccatg
atggccgaaattcaggcgctgcataaagccattgctccccaggaaacgctgttcgtcgtc
gacgccatgaccggccaggatgcggtgaataccgccaaggccttccatgaagcgctgccg
ctgacaggtgtcattctgaccaaggccgacggtgacgcccgtggcggtgccgcgctgtcg
gtgcgccacgtgaccggcaagccgatcaagttcatgggggtgggtgaaaaggtcgatgcc
ctggaacccttccatcctgatcgagtagcctcgcgcattctgggcatgggcgacatgctg
tcgctgatcgaagaagccgagcgcaccgtcgacaaggacaaggccgcgaagctggccagc
aaggtcaagaaaggcgatggcttcgacctggaagacttccgcgaccagctccagcagctc
aagaaaatgggcggcatgggcggcctgttgggcaagctgccgggcatgggtcagatggca
gagatggcccaaggccccgggccagaaaaggagctgggcaagctggaggcgctgatcaac
tccatgacgcccaaagagcgccgcaagcccgatatcatcaacggttcgcgcaagcgccgc
atcgcggcaggtgccggacttcaggtgccggatttgaaccggctgctgaagcagcacaag
cagatgcagaaaatgatgaagaaagccgggcagaagggcggcatgcagaagatgatgcgt
ggcatgtctggcctgatgggcggtaaaggccccggcggcccaggtggccccggcggtatg
ggaggcatgggcggaatgggtggcccgggtggtttgccctggcgctga

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