Halomonas hydrothermalis: CLM76_03575
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Entry
CLM76_03575 CDS
T05117
Name
(GenBank) poly(A) polymerase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
hhh
Halomonas hydrothermalis
Pathway
hhh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hhh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CLM76_03575
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hhh03019
]
CLM76_03575
Enzymes [BR:
hhh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
CLM76_03575
Messenger RNA biogenesis [BR:
hhh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
CLM76_03575
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
ATH76736
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All DBs
Position
782543..783928
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AA seq
461 aa
AA seq
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MFKGFTRLLHSPGEHLKSLLDSPESADNALSPRIIPRSEHPVSRQQISEAALKVLYRLNG
AGYDAYLVGGCIRDALLGKMPKDFDVATNATPEQVRDLFRNSRLIGRRFRIVHVRFGREV
IEVTTFRGKPQDEHGDHIAHQSDDGLLLRDNVWGSIEEDALRRDFTVNALYYNIADFTIH
DFANGAQDIDSRTLRLIGDPATRYREDPVRMLRAVRFAAKLDFTIEPATEAPMYDLAPLL
LNIPPARLFDEVLKLFMSGHGLITFRLLSHYNLFGMLFPEAEEAMADAAWAEELIEQALI
NTDKRIAEDRPVTPAFLLAAFLWAPVVHRQAELEREGMPSVPALQTAAQQVVSRQLQHTS
IPKRFGIPMREIWELQSRLPMRRGKRAFQTREHPRFRAAYDLLLLREQAGEIPRGLGDWW
TAFQKGDEHEQLRLLQKVGSDPASQGDRRRKKKRKSRKGEA
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgtttaaaggatttacccgtttattacatagtccgggagagcacttgaaatcactgctc
gattccccagagagcgctgacaacgcgctcagcccacgcattattccgcgctccgagcac
cccgtttctcgtcagcaaatcagtgaggccgcgctgaaggtgctctatcgcctcaatggt
gctggctacgatgcctacctggtgggtggctgcattcgtgatgcgctgctgggcaagatg
cccaaggatttcgacgtggccaccaacgccacgccggagcaggtgcgtgacctgtttcgc
aactcacgtctgatcggccgtcgcttccgtatcgtgcatgtgcgctttggtcgtgaggtc
atcgaggtgactaccttccgcggcaagccgcaggacgagcacggcgatcacattgcccat
cagtccgacgatggcttgctgctgcgcgacaacgtatggggcagtatcgaggaggatgcg
ctacggcgtgacttcacggtcaatgcgctctattacaacattgccgacttcaccattcac
gacttcgccaacggcgctcaggacatcgattcacgcactctgcgcctgatcggagaccct
gccacgcgctatcgggaagacccggtgcgcatgctgcgggcggtccgctttgctgccaag
ctcgacttcaccatcgaaccggccaccgaagcgccgatgtacgacctggcgccgctgctg
ctgaacattcctccggcacgcttgttcgacgaagtgctcaagctgttcatgtccggccat
gggctgattaccttccgcctgctgagccactacaacctgttcggcatgctcttcccggaa
gccgaagaggccatggccgatgccgcctgggcagaggagttgatcgagcaggcgctgatc
aataccgacaagcgcattgccgaagaccgcccggtcacgcctgcgtttctgctggcggcg
ttcctctgggcaccggtggtacatcgccaggcagagctagaacgcgagggcatgccttca
gtacccgcactgcaaaccgccgcccagcaggtcgtttctcgtcagttgcagcatacgtcg
attcccaagcgcttcggtattcccatgcgggaaatctgggagctgcaatcgcgcctgccc
atgcggcggggcaagcgcgccttccagacccgtgagcatccacgttttcgggcagcctac
gacctgctgttgctccgtgagcaggcaggcgagatcccgcgtggtctgggcgactggtgg
acggccttccaaaaaggggacgaacacgaacagctgcgcctgctgcaaaaagtcggcagc
gacccggcaagccagggcgaccggcggcgcaagaaaaagcgtaaatctcgcaagggcgaa
gcgtga
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