Vreelandella venusta Y2: CLM76_03610
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Entry
CLM76_03610 CDS
T05117
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
hhh
Vreelandella venusta Y2
Pathway
hhh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hhh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CLM76_03610 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hhh03019
]
CLM76_03610 (pnp)
03016 Transfer RNA biogenesis [BR:
hhh03016
]
CLM76_03610 (pnp)
Enzymes [BR:
hhh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
CLM76_03610 (pnp)
Messenger RNA biogenesis [BR:
hhh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CLM76_03610 (pnp)
Transfer RNA biogenesis [BR:
hhh03016
]
Prokaryotic type
tRNA degradation factors
CLM76_03610 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
KH_2
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-ProteinID:
ATH76742
LinkDB
All DBs
Position
complement(789470..791632)
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AA seq
720 aa
AA seq
DB search
MLKEVAVNPVKKTFQYGRSTVTLETGRIARQATGAVMVTMDETVVLCTVVAKKDVNPAQS
FFPLSVHYQEKTYAVGKIPGGFFKREGRPTEKETLTSRLIDRPIRPLFPKGFMNEVQVIC
TVLSTDRNHDPDIAAMLGTSAALSISGVPFNGPIGAARVGFNEEQGYFLNPTVEELTTSE
LDMVVAGTENAVLMVESEAQELLEDEMLGAVLFGHQEMQVAVNAIKELAAEAGKPRWDWQ
PPAENVALKTAMADAFEAKVGDAYRITDKMARQDALAELKEAALAQLVAEEGDSSEGKFS
ADDVKGAFAALEKRVVRSRVVKGEPRIDGRDNVTVRPLAIEVGVLPKTHGSAIFTRGETQ
AIAVATLGTLRDSQLIESLEGERKDRFMLHYNFPPYSVGEAGFMGGPKRREIGHGRLARR
GVQAMLPSEEDFPYTIRVVSEITESNGSSSMASVCGSSLALMDAGVPLKAPVAGIAMGLV
KDEDGYAVLTDILGDEDHLGDMDFKVAGSEEGVTALQMDIKIEGINEEIMETALQQAHDA
RIGILAQMNAVISQSRTDVSENAPSMATIKIDPDKIRDVIGKGGATIRKICEDTGASIDL
DDDGTVRIYAEDKAAAKKAIDTVLAITAEAEIGKLYQGKVVRIADFGAFVNIMPGTDGLV
HISQIVAERVNNVRDFLNEGDDVVVKVLDIDNRNRVKLSIKEITEEEKAAFAAAEADIAG
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atgttaaaggaagtcgccgtgaatccggtcaaaaaaacgttccaatacggtcgtagcacc
gtcaccctcgaaactgggcgtatcgctcgccaggccactggtgccgtcatggtcaccatg
gacgagaccgtcgtactgtgtacggtggtggcgaagaaagacgtcaatcccgcccaatcc
ttcttcccgctttcggtgcactaccaggaaaagacctacgcggtcggcaagattcctggc
ggcttcttcaagcgtgaaggtcgccccaccgagaaagagaccctcacgtcacggctgatc
gaccgccccattcgcccgctgttccccaagggcttcatgaacgaagtgcaggtgatctgt
accgttctgtcgactgaccgcaaccatgatccggatattgcggccatgctgggcacctcg
gcagcgctgagcatctcaggcgttccgttcaatggcccgattggcgctgcgcgcgttggc
ttcaacgaagagcagggctacttcctgaaccccaccgtcgaagagctgaccacctccgag
ctggacatggtggtggccggtaccgaaaacgccgtgctgatggtggagtcggaagctcag
gagctgctggaagacgaaatgctgggtgccgtactgttcggccaccaggagatgcaggtg
gcggtcaacgccatcaaggaactggctgctgaagcaggcaagccgcgctgggactggcag
ccgcccgccgaaaatgtggcgctgaaaaccgccatggccgatgcgttcgaagccaaagtg
ggcgatgcgtaccgcattaccgacaagatggcgcgtcaggatgcgctggccgagctgaaa
gaggctgctttggcccagctggtggctgaagaaggtgactcctcggaaggcaagttcagt
gccgatgacgtcaagggggcctttgcggcgctggagaagcgcgtggtgcgctctcgcgtc
gtcaagggcgagccgcgcatcgacggccgcgacaacgtcaccgtgcgcccgctggccatc
gaagtcggcgtgctgcccaagactcacggctctgccatcttcacccgtggtgaaacccag
gccatcgccgtggcgacactgggtacgctgcgcgactcgcagctgatcgagtcgctggaa
ggcgagcgtaaagaccgcttcatgctgcactacaacttccctccctactcggtgggtgaa
gcaggcttcatgggtggcccgaagcgtcgtgaaatcggtcacggccgtttggctcgtcgt
ggcgtccaggccatgctgccctccgaagaagatttcccctacaccattcgcgtggtgtcg
gaaatcaccgaatccaatggttccagctccatggcctcggtctgtggctcctcgctggcg
ctgatggatgcaggcgttccgctgaaagccccggtggcgggtattgccatgggtctcgtc
aaggacgaagacggctacgcggtgctgaccgacatcctgggtgacgaagaccatctgggc
gacatggacttcaaggtggcgggttctgaagagggtgttactgccctgcagatggacatc
aagatcgaaggcatcaacgaagagatcatggaaactgcgctgcagcaggctcacgatgcg
cgtatcggtatcctggcgcagatgaacgccgtgatcagccaaagccgtaccgatgtctcc
gagaatgcgccttccatggccaccatcaagatcgatccggacaagatccgtgacgtcatc
ggcaagggcggcgctaccatccgcaagatttgcgaagacaccggcgcgtccatcgacctc
gatgacgacggcaccgtgcgcatctatgccgaagacaaggctgcggccaagaaggccatc
gataccgtactggccatcacggcagaagcggaaatcggcaagctctaccagggcaaggtc
gtgcgcatcgccgacttcggggctttcgtgaacatcatgccgggtaccgatggcctggtg
catatctcgcaaatcgtcgccgagcgcgtcaacaacgtgcgcgatttcctcaacgaaggt
gacgatgtcgtcgtgaaggtgctggatatcgacaaccgcaaccgcgtgaagctctcgatc
aaagagatcaccgaggaagagaaggccgcgtttgccgctgccgaggcggatatcgcaggc
taa
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