Vreelandella venusta Y2: CLM76_03620
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Entry
CLM76_03620 CDS
T05117
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
hhh
Vreelandella venusta Y2
Brite
KEGG Orthology (KO) [BR:
hhh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hhh03016
]
CLM76_03620
Enzymes [BR:
hhh01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
CLM76_03620
Transfer RNA biogenesis [BR:
hhh03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CLM76_03620
Prokaryotic type
CLM76_03620
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
DUF6417
Motif
Other DBs
NCBI-ProteinID:
ATH76744
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All DBs
Position
complement(792158..793078)
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AA seq
306 aa
AA seq
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MARRRRGLPVNGVVLLDKPKGISSNHALQRVRRLFEAQKAGHTGTLDPMATGLLPICLGE
ATKFSAHLLEADKMYRTRVELGVITDTGDAEGNVIERREVPSLTAEDVEAVLVRFRGEID
QVPPMYSALKHQGKKLYELAREGKQVERAARRVSVYDARLLAFEGHAFELEVSCSKGTYI
RTLAEDIGLALGCGAHISQLRRLKTGPFGGDAMWTLEALEALASQAHREAELMPVDVLVD
HLPSLSVDDAAYDRLAHGQSVQLASGELAADALARLYHAETFIGLGVVKGPQEVAPKRLL
STVARS
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atggctcgtcgccgtcgcggattaccggtgaatggcgtggtgctgctggacaagcccaag
ggtatttccagcaaccatgcactccagcgtgtgcgccgtctgttcgaggcgcagaaagcc
gggcataccggcacgctggaccccatggcaacgggcttgctgcccatttgcctgggggag
gccaccaagttttccgcacacctgctggaagccgacaagatgtatcgcacccgggtcgaa
ctgggcgtgatcaccgacaccggcgatgccgagggtaacgtcatcgagcggcgtgaggtg
ccaagcctcaccgccgaggatgtggaggccgtgctggtccgctttcgtggcgagatcgac
caggtgccgcccatgtattcggcgttgaagcaccagggcaagaagctctacgagctagcg
cgcgagggcaagcaggttgaacgtgcagcacggcgggttagcgtgtatgatgcgcgcctg
ctggcgttcgagggtcatgccttcgagctggaagtcagttgcagcaagggaacctacatc
cgaaccctggccgaagacattggcctggcgctggggtgtggtgcccacatcagtcaactg
cgcaggctcaagaccggccccttcggtggcgacgccatgtggaccctggaggcgctggaa
gcgctggcaagtcaggctcatcgcgaggcggaactgatgcccgtcgatgtgctggtggat
catctgccatcgctcagcgtggacgatgctgcctatgacaggctggcccacgggcagtcg
gtgcagctggccagtggcgagttggcagcagatgcgctggcacgactttatcacgccgag
acctttatcggtcttggcgttgtaaaagggccgcaggaagtggctcccaagcgactgttg
agtacggtcgctcgttcgtaa
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