Vreelandella venusta Y2: CLM76_04595
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Entry
CLM76_04595 CDS
T05117
Name
(GenBank) RNA polymerase-associated protein RapA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
hhh
Vreelandella venusta Y2
Brite
KEGG Orthology (KO) [BR:
hhh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hhh03021
]
CLM76_04595
Transcription machinery [BR:
hhh03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
CLM76_04595
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RapA_C
Tudor_1_RapA
Tudor_RapA
Helicase_C
SNF2-rel_dom
ResIII
DEAD
YGR130C_N
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
ATH76914
LinkDB
All DBs
Position
980907..983852
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AA seq
981 aa
AA seq
DB search
MSDFSPGQRWISDGEAELGLGTVLNCDARSVTILFSASQETRTYNTRQAPLTRVMFGSGD
RVLSADGWQMIVDDSKESRGLITYIGEDSDGNLRELPEARLADTMQFDQARDRLLTGQVD
RNDWFDLRFRTLHHFQRIEQHSALGFAGPRIDLIPHQLYIADEVARRHAPRVLLADEVGL
GKTIEAGLILHRLLLAGRVERALILVPDSLTHQWLVELLRRFSLTVTLLDEHQSQAHGSA
NPFESAQLVLASQGWLFANRHRQEQALASRFDLLIVDEAHHLDWHPETSGPGYLCVEQLA
AEIPGLLLLTATPEQMGQESHFARLRLLDPERYHDIERFKDEEQHYVAVASAIDALEELP
QTPSARERVATIADDRDSQALLATLCNAEASSEQQDAARAQLRDALLDRHGTGRVMFRNS
RRHVGGFPERRLHLTKLELPSAYRRVLRRLERDEDYLDELLIETGMDHPDVLIYPDAMYR
ELSNDPLNGEPWWHIDPRVNWLLEKLSDDSEDGFANDKVLVIAHHRETAEGLAEGLRVLG
GYQAPVFHEGLSLVERDRAAAAFADEEDGCQVLVCSEIGSEGRNFQFCRHLVMFDMPQHP
DQLEQRIGRLDRIGQRHAIELHVPSFIGSPGERLQRWYDEGMAAFSAPHGIGSDLFDAFG
DALADALLDDEALTEIIDETHAMFTAKLAERDAGRNRLLELNACRPAQAQQVIDAVRELD
EDPALPRYVERALDIFGVDSQEIGNGLLHLQPSQHMLDGLPGLVKGEEGFSATYSRAQAL
ARDDVQRLSWEHPLLREMMGRILDGTMGNTALALLRHPAIPSGRLMAELIFRTHCPAPKA
LHLNRFLPPTAVRVLLDESGANLTSKISFTGLGKNLQKVNKSLARDLIKSRHDQLRDLLT
QGESEAERELPSIVEAAETRMRAQLDAELARLTALAEHNPAVRSEELEALKQERQALSDA
IENTRLRLDSVRVIITVDPNA
NT seq
2946 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatttttctcccggccagcgctggattagcgacggtgaggccgagcttgggctt
ggcaccgtgcttaactgcgacgcccgtagcgttaccatcttgttcagtgccagccaggaa
acccgcacctacaacacccgccaggcgcccctcacccgagtcatgttcggcagcggtgac
cgggtcctgtcagccgacggctggcagatgatcgtggacgacagcaaagagagccgtggc
ctgatcacctatatcggtgaagacagcgacggcaacctgcgcgaactgcccgaagcacgc
ctggccgacaccatgcagttcgaccaggcccgtgaccgcctgctgaccggccaggtcgat
cgcaacgactggttcgacctgcgttttcgtaccctgcatcactttcagcgtatcgaacag
cacagcgccctggggtttgccgggccgcgcatcgacctgattccccaccagctctatatc
gccgacgaagtcgcacgccgccacgcccccagggtgctgctggccgatgaagtgggactt
ggcaagaccattgaagcaggcttgatcctccaccgcctgctgttagcaggccgcgtagag
cgcgcgctgattctggtacccgatagcctgacccaccagtggctggtggagctgttgcgc
cgcttctcgctgaccgtcacgctgctcgacgagcatcagagccaggcccacggcagcgcc
aatccgttcgagagcgcccagctggtgctggccagccagggctggctgtttgccaatcgt
caccgtcaggaacaggccctggccagccgtttcgacctgctgatcgtcgacgaggcgcat
cacctggattggcacccggagaccagcggccccggctacctgtgcgtggagcagctggcc
gccgagatccccggcctgctgctgctcaccgccacccccgagcagatgggccaggagagc
cactttgcgcggctacgcctgctggacccggagcgctaccacgacatcgagcgcttcaag
gacgaagagcagcactacgtcgccgtggccagcgccatcgatgcgctggaggaactgccc
cagacacccagcgcccgcgagcgcgtggccaccatcgccgacgaccgcgacagccaggcc
ctgctggcgacgctgtgcaacgccgaggccagctctgaacagcaggacgcggcccgtgcc
caactgcgcgatgcgctgctcgaccgtcacggcaccgggcgcgtcatgttccgcaacagc
cgacgccacgtgggcggcttcccggagcggcggctgcacctgaccaagctggagctgccc
tccgcctatcgccgagtgctgcgccgcctggagcgcgacgaggactatctggacgagctg
ctcatcgaaaccggcatggaccacccggacgtactgatctacccggatgccatgtaccgc
gagctgagcaatgacccactgaacggtgaaccctggtggcatatcgacccccgggtcaac
tggctgctggaaaagctcagcgacgacagcgaagacggttttgccaacgacaaggtgctg
gtcattgcccaccaccgcgagaccgccgaagggctggccgaaggcctgcgtgtgctgggc
ggctaccaggcaccggtattccacgaagggctgtcgctggtggagcgcgaccgcgccgcc
gccgccttcgccgacgaggaagatggctgccaggtgctggtgtgctccgaaatcggctcc
gaaggccgcaacttccagttctgtcgtcatctggtgatgttcgacatgccccaacacccg
gaccagctggagcagcggattggccgcctcgaccggattggccaacgccacgccatcgag
ctgcacgtgcccagcttcatcggcagcccgggggagcggctgcagcgctggtacgacgaa
ggcatggccgctttcagcgcgccccacggcattggcagcgacctgttcgacgcctttggc
gacgcgctggccgatgcgctgctcgacgatgaggcgcttaccgagatcatcgacgaaacc
cacgcaatgttcaccgccaaactggccgagcgcgacgcgggccgcaaccggttgctggag
ctgaacgcctgccgcccggcccaggcgcaacaggtcattgatgcggtacgtgagttggat
gaagacccggcactgccccgctacgtggagcgtgcgctggatatcttcggggtcgatagc
caggaaattggcaatggcctgctgcacctgcagcccagccagcacatgctggacggactg
ccggggctggtcaaaggggaagagggcttctctgccacctacagccgtgcccaggccctg
gcccgggatgacgtgcaacgcctctcctgggagcacccgctgctgcgcgagatgatggga
cgcattctggatggcaccatgggcaatactgccctggcgctgctgcgccatccggccatt
cccagtggacgactgatggccgagctgatcttccgcacccactgcccggcgcctaaagcg
ctgcacctgaaccgctttttgccccccacggccgtccgggtactgctggatgagtcaggg
gccaatctgaccagcaagatctcctttaccgggctgggcaaaaatctgcagaaggtcaac
aagtcgctggcccgtgacctgatcaagagccgtcatgaccagctgcgtgacctgctgacc
cagggggagagcgaggccgagcgggagctgcccagcatcgtggaagccgccgaaacgcgc
atgcgtgctcagctggatgccgagctggcccgcctgacggcgctggcagagcacaacccg
gcggtgcgcagcgaggagctggaagccctcaagcaggagcgtcaggcgctcagcgatgcc
atcgaaaacactcgcctgcggctcgactcggtgcgggtcatcatcaccgtggacccgaac
gcctag
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