Halomonas hydrothermalis: CLM76_07725
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Entry
CLM76_07725 CDS
T05117
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
hhh
Halomonas hydrothermalis
Brite
KEGG Orthology (KO) [BR:
hhh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hhh03400
]
CLM76_07725
Enzymes [BR:
hhh01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
CLM76_07725
DNA repair and recombination proteins [BR:
hhh03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
CLM76_07725
Prokaryotic type
CLM76_07725
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
ATH77483
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All DBs
Position
complement(1632406..1633983)
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AA seq
525 aa
AA seq
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MAQAPLQVVWFKRDLRIHDHVPLTNAAAAGPVLPLFAIEPDQWQAPDSALRHWQFAADSL
VDLAQALDTLGLPLCLWQGDMLECLAALKAHYGELVLHSHQETGNAWSFARDQRVQAWCQ
AHQVPWQEARQQGVIRGLSSRTGHQSRWESHWETLMAAPTCPAPQAAVAAPGWEAFHHVD
VAQLPSLTLGFDTTPCPQRQRGGRSEGRALWLSFITQRGRRYRGSLSKPLLAWEFGSRLS
PHLAWGTLSMREVVQSLRRQRQKHADDTAWARSLRAFTSRLYWHCHFIQKLESEPSIEQQ
TLHPALRGLRERDPEHPHLIAWKRGQTGVPLVDACMRSLTATGWINFRMRAMLISHATFG
LGLHWVEPALHLARLFTDFEPGIHYPQVQMQAGATGTNALRVYNPIKQAEDNDPDGEFVA
RWVPELAPLPLEWRAKPWALPESLQKRFGFQPGIHYPIPNDFEAEARHWKKLLYELRRTP
EARDASQAIVDKLASQRRPPAQRSKKAKADNRQQLLLFGEGGVEE
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atggctcaggcaccccttcaggtcgtttggttcaaacgcgatttgcgcattcacgatcac
gtaccgctgaccaacgccgcagcggcaggcccggtgctgccgctgtttgccatcgagccc
gaccagtggcaagcacccgacagcgccctgcgccactggcagtttgccgccgattcgcta
gttgatctggcccaggcgctcgacaccctgggcctgccgctctgcctgtggcaaggcgat
atgctggagtgcctggccgccctcaaagcgcactacggcgaactggtgctgcactcccac
caggagaccggcaacgcctggagcttcgcgcgggaccagcgcgttcaggcctggtgccag
gcccaccaggtgccctggcaggaagcccgccagcagggcgtgattcgcgggctgagcagc
cgcaccgggcatcaatcccgctgggaaagccactgggaaacgctgatggccgcccccacc
tgccccgcgccacaagcagcggtggccgcacccggttgggaagcctttcatcacgtagac
gtagcgcaactgccctcgctgaccctggggttcgataccacgccctgcccccaacgccag
cggggtgggcgcagcgaaggccgcgcgctgtggctgagctttattacccagcgcgggcgg
cgctatcgcggctcgctttccaagccgttactggcctgggaatttggttcgcggctctcc
ccgcacctggcctggggcacgctctcgatgcgcgaagtggtgcaatccctgcgccgccag
cgacaaaaacacgccgacgacaccgcctgggcccgctcgctgcgcgcctttacctcgcgg
ctctactggcactgccacttcattcaaaagctggagagcgaacccagcatcgagcagcaa
accctgcaccccgcgctgcgcggcctgcgagagcgcgacccggaacatccgcacctgatc
gcctggaagcgcggccaaaccggcgtgccgttggtggatgcctgcatgcgcagcctgacc
gccaccggctggatcaactttcgcatgcgcgccatgctgatctcccacgccaccttcggc
ctagggctgcactgggttgagccagccttacatttggcgcggctattcaccgacttcgaa
cccggcattcactacccccaggtgcaaatgcaagcaggcgccaccggcaccaacgccctg
cgggtctacaaccccatcaagcaagcggaggataacgacccagatggtgagtttgtcgcc
cgctgggtgcccgagcttgcgcccctgcctctggaatggcgcgccaaaccctgggccctg
ccagaaagcctgcaaaaacgcttcggctttcagcccggcatccactaccccatccccaac
gacttcgaggccgaagcacgccactggaagaagcttctctacgaactgcgccgcacgccg
gaagcgagggatgccagccaagcgattgtggataagctggcgagtcagcggcggccgcct
gctcagcgtagtaagaaagcgaaggctgataatcggcagcagcttttgttgtttggtgag
ggcggagtggaagaatag
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