Vreelandella venusta Y2: CLM76_08590
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Entry
CLM76_08590 CDS
T05117
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
hhh
Vreelandella venusta Y2
Pathway
hhh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hhh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CLM76_08590 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hhh03021
]
CLM76_08590 (rho)
03019 Messenger RNA biogenesis [BR:
hhh03019
]
CLM76_08590 (rho)
Transcription machinery [BR:
hhh03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
CLM76_08590 (rho)
Messenger RNA biogenesis [BR:
hhh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CLM76_08590 (rho)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
OB_RNB
S1CSD-TOTE-2
AAA_25
NACHT
AAA_22
AAA
Fungal_virus_P2_C
Motif
Other DBs
NCBI-ProteinID:
ATH77641
LinkDB
All DBs
Position
1822569..1823828
Genome browser
AA seq
419 aa
AA seq
DB search
MNLTELKQKTVPELLDIAREMGIDNLARSRKQDIIFAILKKHAKSGEDIYGDGVLEILQD
GFGFLRSADSSYLAGPDDIYVSPSQIRRFNLRKGDSISGKIRPPKEGERYFALLKVSQIN
FDRPENAKHKILFENLTPLFPTERLRMEIGNGSTEDLTARIIDLTAPIGKGQRGLLVSPP
KAGKTLMLQNIATSITRNNPECHLIVLLIDERPEEVTEMSRTVRGEVVASTFDEPPARHV
QVAEMVIEKAKRLVEHKKDVVILLDSITRLARAYNTVVPSSGKVLTGGVDAHALEKPKRF
FGAARNIEEGGSLTIIATALVDTGSKMDEVIFEEFKGTGNMEAHLDRKLAEKRVFPAINI
RRSGTRREDLLASEDEMQRMWILRKLLNPMEDTAATEFLIDRLKDTKTNLEFFEAMKRR
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgaatctcactgaactcaagcaaaaaaccgttcccgagctgctcgatattgcccgcgag
atgggtatcgacaacctcgcccgttcgcgcaagcaggacatcattttcgccatcctcaag
aaacacgccaaaagtggcgaggacatctatggcgacggtgtactggaaattcttcaggac
ggctttggcttcctgcgtagcgcggatagctcgtacctcgccggaccggacgacatctac
gtctcgccttcacagattcgtcgtttcaatctgcgcaagggcgactccatttctggcaag
atccgtccgccgaaagagggtgagcgttactttgccctgttgaaggtgagccagatcaac
tttgaccgcccggaaaacgccaagcacaagattctcttcgagaacctgacgccgctgttt
cccaccgagcgtctgcgcatggagatcggtaacggctccaccgaagacctcaccgcacgt
atcatcgacctgaccgcccccatcggcaaagggcagcgtggtttgctggtgtcacccccc
aaggcgggtaagacactgatgctgcagaacatcgccacttccatcacgcgtaacaacccc
gagtgtcatctgatcgtactgctgatcgatgagcgcccggaggaagtcaccgagatgtcg
cgcaccgtgcgtggcgaagtcgtggcctcgacgttcgatgagccgccggcgcgtcacgtt
caggtcgccgaaatggtcatcgagaaggccaagcggctggtcgagcacaagaaggacgtg
gtgattctgctcgactccatcacccgtctggcgcgggcctacaacaccgtggtgcccagc
tctggcaaggtactgaccggtggtgtcgatgcccacgcgctggagaagcccaagcggttc
tttggtgcggcgcgtaacatcgaagagggcggcagcctgacgatcatcgccacggcgctg
gtcgacaccggctccaagatggacgaggtcatcttcgaagagttcaagggcaccggcaac
atggaagcccacctggaccgcaagttggccgaaaaacgcgtcttcccggccatcaacatt
cgtcgcagcggcacgcgtcgcgaagacctgctggcgtcggaagacgaaatgcagcgcatg
tggattctgcgcaagctgctcaacccgatggaagatacggccgcgaccgagttcctgatc
gaccgtctgaaagataccaagacgaatctggaattcttcgaggcaatgaagcgccgttaa
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