Vreelandella venusta Y2: CLM76_08820
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Entry
CLM76_08820 CDS
T05117
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
hhh
Vreelandella venusta Y2
Pathway
hhh02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
hhh00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CLM76_08820
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hhh02000
]
CLM76_08820
Transporters [BR:
hhh02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
CLM76_08820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
DUF5818
Motif
Other DBs
NCBI-ProteinID:
ATH77683
LinkDB
All DBs
Position
complement(1871092..1872690)
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AA seq
532 aa
AA seq
DB search
MTFIPNLICYKITLLFHQEFLMKHAFAAGVTLLLALPVTPAAWANEQRLDIVAPWEIKGP
DPAISGYVFGRMRVAETLVDTDSNGQLAPGLASAWEVSEDGLTWRFTLREGATFHDGSAV
TAEAALHSLEVARAKPGILDSAPIQQMRADQGAVVIELESPFSPLPALLAHSTALILADA
AFADNGDVVAMIGSGPYQVEALSPPQRMTVTRFEDYWGEPANIASASYLAVSRGETRALM
AESGDADIVYTLDPASQARLARNARLALHAEPLPRTIMLKLNAGHALLEDARARQALSMA
IDRQGIAAGLLRTPEAAAAELFPDSLGPWHLGLAPADAQDIEAAKALLAELGWEAGRDGM
LERDGQPFALTLRTYSDRPELPVVATALQDQWRDIGVALEVAVGNASEIPSGHHDNSLEV
GLVGRNYGLVPNPLGSLLDDIGSDANSMGGDWGTMNWRDEEVAQWLDALRQATDEQTLND
LAPLVAERLHQQMPLIPVAWYQQTAAVNSALEGFSIDPLERSYRIDQMGWAE
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atgactttcatacctaacctgatatgttataaaataactcttttattccatcaggagttt
cttatgaagcacgcctttgctgcgggagtcaccctcctactggctttacccgtaacgcct
gctgcatgggcgaacgaacagcgcctggatatcgtcgccccgtgggaaatcaaagggcca
gacccggccatctcgggctatgtatttggccgcatgcgcgtggccgagaccctggtggac
accgactcgaacgggcagcttgccccaggactcgccagcgcctgggaggtctccgaagac
ggcctgacatggcgtttcacgctgcgggagggagccacctttcatgacggcagcgccgtg
accgccgaggcagcgctccacagcctggaagtcgcccgtgccaaaccgggcatactcgac
agcgccccgattcagcagatgcgggccgaccagggtgccgtggtcatcgagctggaaagc
cccttctcgcccctgccggccctgttggcacactccaccgcgctgattcttgccgatgcg
gcgtttgccgataatggcgacgtcgtggcgatgatcggtagcggcccttatcaggtggag
gcgctctcgccaccgcagcgcatgaccgtcacgcggttcgaggattactggggagagccc
gccaacattgccagcgccagctacctggccgttagccgaggcgaaacccgcgccctgatg
gccgaaagcggtgacgccgatatcgtgtacaccctggaccccgccagccaggcacgcctg
gcgcgcaacgcacggcttgcgctgcacgccgagccgctgccacgcaccatcatgctgaaa
ctgaacgcaggccatgcgctgctggaagatgcgcgcgctcgtcaggcgctgagcatggcc
atcgaccggcagggcattgcggcaggcctgctgcgcaccccggaagccgcggccgccgaa
ctcttcccggatagccttggcccctggcacctggggcttgcccctgcggatgcccaggat
atcgaagccgccaaagcgctgctggccgaactgggctgggaagcagggcgtgatggcatg
ctggagcgcgatggccagccgtttgccttgaccctgcgcacctattcggatcgccccgag
cttccggtcgtggccactgccttgcaggatcagtggcgcgatattggtgtcgcgctggaa
gtcgccgtgggtaacgccagcgagatcccttccggccaccacgacaacagcctggaagtc
ggcctggttggccgcaactacggtctggtgcccaacccgctgggctcgctgctggacgat
atcggcagtgacgccaactcgatgggcggcgactggggcaccatgaactggcgtgacgaa
gaggtggctcagtggctggacgcgctgcgtcaagccaccgacgagcagaccctcaatgac
ctggcaccgctggtcgcagagcgccttcaccagcagatgccgctgattcccgtggcctgg
tatcagcaaaccgcagcggtcaacagcgccctggaagggttctccatcgatccgctggag
cgcagttaccgcatcgaccaaatggggtgggcagagtga
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