Halomonas hydrothermalis: CLM76_10355
Help
Entry
CLM76_10355 CDS
T05117
Name
(GenBank) RNA polymerase subunit sigma-24
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
hhh
Halomonas hydrothermalis
Pathway
hhh02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
hhh00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CLM76_10355
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hhh03021
]
CLM76_10355
Transcription machinery [BR:
hhh03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CLM76_10355
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
Sigma70_ECF
HTH_23
GerE
HTH_11
HTH_28
Phage_terminase
Motif
Other DBs
NCBI-ProteinID:
ATH77970
LinkDB
All DBs
Position
2192037..2192588
Genome browser
AA seq
183 aa
AA seq
DB search
MTIPPAVGHSAYHTGCRESLGQLYHHHQPWLQQLLRQRLGCGESAADLAQDAFVRLLKTP
RHFDSFDGTRAYLSRMAKGLCVDHWRRQDIERAWRETLAVRAEVDMPSVEHHQIVIETLC
EIDRMLAQLPEKVVSAFLASQLHGKPYRQIAEELGVSERMVKKYMAQAMLQCALIEAGFE
ASL
NT seq
552 nt
NT seq
+upstream
nt +downstream
nt
atgacgatccctcccgccgtcgggcactcggcttatcatacgggttgtcgagagtcactg
ggccagctctatcatcaccaccagccttggttgcagcagttgctcaggcaacggctggga
tgcggcgaatcggcggccgatttggcgcaggatgcgtttgtgcggttgctgaagacgccg
cgccatttcgatagtttcgatggcacccgagcctatctcagccggatggccaagggactg
tgcgtggatcattggcgccgtcaggacatcgagcgagcctggcgagagacattggccgtc
cgcgcggaagtggacatgccctccgtcgaacatcatcagatcgtcatcgaaaccctgtgt
gaaatcgaccgcatgctggcgcaactgccggagaaagtcgtcagtgcctttctggcctcg
cagctacacggtaaaccctatcggcagattgctgaggagctgggggtttccgaacggatg
gtcaaaaaatatatggcacaggccatgctgcaatgcgcgttgatcgaagcaggcttcgag
gcgagcctctag
DBGET
integrated database retrieval system
