Halomonas hydrothermalis: CLM76_12790
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Entry
CLM76_12790 CDS
T05117
Name
(GenBank) hypothetical protein
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
hhh
Halomonas hydrothermalis
Pathway
hhh03030
DNA replication
hhh03430
Mismatch repair
hhh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hhh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CLM76_12790
03430 Mismatch repair
CLM76_12790
03440 Homologous recombination
CLM76_12790
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hhh03032
]
CLM76_12790
03400 DNA repair and recombination proteins [BR:
hhh03400
]
CLM76_12790
Enzymes [BR:
hhh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CLM76_12790
DNA replication proteins [BR:
hhh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CLM76_12790
DNA repair and recombination proteins [BR:
hhh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CLM76_12790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
DNAX_ATPase_lid
DNA_pol3_tau_5
AAA
AAA_16
RuvB_N
AAA_22
AAA_5
AAA_14
AAA_30
AAA_18
AAA_2
AAA_19
Mg_chelatase
nSTAND3
AAA_24
TsaE
AAA_28
DciA
NTPase_1
Herpes_Helicase
Rad17
Motif
Other DBs
NCBI-ProteinID:
ATH78403
LinkDB
All DBs
Position
2720621..2722534
Genome browser
AA seq
637 aa
AA seq
DB search
MSYQVLARKWRPRTFHELVGQAHVQRALVNALDQGRLHHAYLFTGTRGVGKTTLARILAK
CLNCTANGRGDEGVTSTPCGQCPSCEAIDQGRFVDLIEVDAASRTKVEDTRELLDNVQYA
PTQGRYKVYLIDEVHMLSTSSFNALLKTLEEPPPHVKFLLATTDPQKLPATVLSRCLQFT
LKHMPPEKVVEHLSFVLGEEGVEYDESALWLLGKAAAGSMRDAMSLTDQAIAFGQGAVRH
GDVAAMLGTLDHRHVLALVEALANVDVQQLLQEVAQLAEQGPDFAAVLDELTAILHRLAV
AQMVPDAVDNSHGDRAQIQQLAGRFTAEDLQLYYQIGIQGRGDMVHAPDLRSALEMTLLR
MLAFRPQGVPKPPTVPLPLRREPVIEPATEAAAVESEPKKSEPAPPAAQAAPPQTHVARV
SAEPPQNAPESRPPESNVAVAQPAEEPPPWSLDEVNQAAMLSPEPEPEPEPEPEPEPEPE
PEPEPEPEPVHQEPMVSSSSSPSLEGPLDQAGWLGCFDALGLGGLTRNLAAHCQVESDDG
ATLVLRLDPSQSAMQAEVHNQRIERALNGIGLPRKVHFKVAALDTGIETPRQQEERLQQE
RHAEAVDLLYRDPNIEKLRHAFGATLIESTVKPASHS
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atgagctatcaagttctggcccgcaagtggcggccacgcacatttcacgagcttgtgggg
caggcccatgtccaacgcgccctggtcaatgctcttgaccaggggcgtttgcaccacgct
tacctgtttacggggacgcggggcgtcggcaagaccaccctggcacggatattggccaag
tgcctcaactgcacggccaatggccgtggtgacgagggcgtcacgtcgacaccttgtggc
cagtgccccagctgtgaggcgattgaccaggggcgcttcgtcgacctgatcgaagtcgat
gccgcgtcgcgaaccaaggtcgaagatacccgcgagctgctggacaacgttcagtacgcg
cctactcaaggacgttacaaggtgtacctgatcgacgaggtgcacatgttgtcgaccagc
agcttcaatgcgctgctgaagacactggaagaacccccgccccacgtcaagtttctgctg
gcgaccactgacccgcaaaaattacctgccaccgtgctctcccggtgcttgcagttcact
ctgaagcacatgccgcctgagaaggtagtcgaacacctcagcttcgtgctgggtgaagaa
ggcgtcgaatacgacgagagtgcgctttggttgctgggcaaagccgctgcgggctcgatg
cgtgatgccatgagcctgaccgatcaagccattgcttttggtcagggggcggtacgccat
ggcgatgttgcggccatgctgggtacgctggatcatcgccacgtactggcgctggtagag
gcgctggcgaacgtggacgttcaacagctgctgcaggaggttgctcagctcgccgaacag
gggccggactttgccgcagtgctggatgagctgaccgccattttgcaccggctggccgtt
gcccagatggtgcctgatgcggtggataacagtcacggtgaccgcgcccagattcagcag
cttgccgggcgctttaccgccgaagatctgcagctttactaccagatcggtatccaggga
agaggcgacatggtgcatgcgcccgacttgcgcagcgcgctggagatgacgctgttgagg
atgctggcgtttcgcccgcagggggttccaaaaccacccacggtgccgctgccgctgcgt
cgtgaaccggtcattgagcccgcgaccgaggctgcggccgttgagagcgagccaaaaaag
tctgagcctgcgccgcccgctgcgcaggctgcaccgccgcaaacacatgttgcgcgggta
tctgctgagccgccccaaaacgcaccagagagtcgcccaccagaaagtaacgttgctgtg
gcacagccagcagaggagccgcccccctggtcgcttgacgaagtgaatcaggccgccatg
ctttcgccagagccagagccagagccagagccagagccagagccagagccagagccagag
ccagagccagagccagagccagagccagttcaccaagagccgatggtttcctcgtcatct
tcgccctcgttggaaggcccgttggatcaagccgggtggctgggctgctttgatgcgttg
ggcctgggggggctgacgcgtaacctcgcggcacactgtcaggtggaaagcgatgatggc
gccacgctggtgctgcgcctggacccatcgcagtcggccatgcaggctgaggtgcacaac
cagcgcatcgagcgcgcgttgaacgggattgggctgcccagaaaagtgcacttcaaggta
gcggcgctggacacgggaatcgagaccccgcggcagcaggaagagcgtctccagcaggag
cggcatgccgaagcggttgatctactttatcgtgaccccaatattgagaagttacgtcac
gcttttggggctacgctgattgagtcgacggtaaaacccgcatcgcactcttga
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