Halomonas hydrothermalis: CLM76_13115
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Entry
CLM76_13115 CDS
T05117
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
hhh
Halomonas hydrothermalis
Pathway
hhh00071
Fatty acid degradation
hhh00280
Valine, leucine and isoleucine degradation
hhh00310
Lysine degradation
hhh00362
Benzoate degradation
hhh00380
Tryptophan metabolism
hhh00410
beta-Alanine metabolism
hhh00640
Propanoate metabolism
hhh00650
Butanoate metabolism
hhh00907
Pinene, camphor and geraniol degradation
hhh00930
Caprolactam degradation
hhh01100
Metabolic pathways
hhh01110
Biosynthesis of secondary metabolites
hhh01120
Microbial metabolism in diverse environments
hhh01200
Carbon metabolism
hhh01212
Fatty acid metabolism
Module
hhh_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
hhh00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
CLM76_13115
00650 Butanoate metabolism
CLM76_13115
09103 Lipid metabolism
00071 Fatty acid degradation
CLM76_13115
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
CLM76_13115
00310 Lysine degradation
CLM76_13115
00380 Tryptophan metabolism
CLM76_13115
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
CLM76_13115
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
CLM76_13115
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
CLM76_13115
00930 Caprolactam degradation
CLM76_13115
Enzymes [BR:
hhh01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
CLM76_13115
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
CLM76_13115
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
CLM76_13115
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
CLM76_13115
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
ATH78463
LinkDB
All DBs
Position
2799994..2802180
Genome browser
AA seq
728 aa
AA seq
DB search
MIYQGNAITVERRDTQGGNDVAVLTFDLKDESVNKLSSAVVAELGDAVKALQAASGVQGL
MIRSAKDVFIVGADITEFHSLFDKGEEYLVEMNLKVHDIFNAIEDLPYPTVTAINGLALG
GGCEVLLTTDYRVMSEKAKIGLPETKLGILPGWGGCVRLPRLIGADNAVEWIAGGTENRA
DAALKVGAVDAAVAHELLEEAALDILDRANAGELDYQARREEKTSPLKLNAIEQMMAFET
AKGYVAGKAGPHYPAPVEAIKVIQKGAGETRARAQAIEAKSFAKLALSSVAFNLVGLFLN
DQVVKKKGSKYEKLSQPVKQTAVLGAGIMGGGIAYQSASKGTPILMKDIKDDAIELGLKE
ARKLFSKQVERKKLTTEQMAEKLSNIRPTLSYGDFGNVDLVVEAVVENPNVKDAVLTEVE
GMVGENTILTSNTSTISINRLAKNLKRPENFCGMHFFNPVHRMPLVEVIRGEKTSDAAVA
ATVAYARAMGKTPIVVNDCPGFLVNRVLFPYFGGFSFLVEQGADFQRVDKVMEKFGWPMG
PAYLLDVVGMDTAVHANEVMAEGFPDRMAREGKTAIQVMYDNQRLGQKNDKGFYAYEEDK
KGKPKKVSDEQAHALVKDVVKEQKEFSDEDIVARMMVPLCLETVRCLEDGIVETPAEADM
ALIYGIGFPPFRGGALRYIDALGVAEFVALADRLAEELGPLYAPTEKLRAMAKNNEQFYA
GSSAGAQA
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atgatctatcaaggcaatgccatcacggtggagcgtcgtgacacccagggtggcaatgat
gtcgcggtgctcactttcgacctgaaagatgagtccgtcaacaagctttccagtgccgtg
gtggcggagctgggagacgcggtcaaggcgctgcaggccgcaagtggtgtgcaaggtctg
atgatccgcagtgccaaggacgtgtttatcgtcggtgccgacattaccgaattccacagc
ctgttcgacaagggcgaagagtatctggtggagatgaacctcaaggttcacgatatcttc
aacgccatcgaagacctgccgtatcccaccgtgacggcgatcaatggactggcgctgggc
ggcggctgtgaagtgctgttgaccaccgactatcgcgtgatgagcgagaaagccaagatt
ggcctgccggaaaccaaactgggcattctgccaggctggggtggctgcgtgcgcctgccg
cgtctgatcggggcagataacgccgtggagtggattgccggtggcaccgaaaaccgtgcc
gatgccgccttgaaagtaggcgccgttgatgctgccgttgcccacgagctgctggaagag
gcagcgctggacatcctcgaccgtgccaatgccggtgagctggattaccaggcccgccgc
gaggagaaaacctctccgctgaagctcaacgccatcgagcagatgatggccttcgaaacc
gccaaaggctatgtggccggtaaagcaggcccgcactacccggcacccgtggaagccatc
aaggtcattcagaaaggggccggagaaacccgtgcgcgtgcccaggccatcgaagccaag
tccttcgccaagctggcgctgagcagcgttgccttcaacctggtggggctgttcctcaac
gatcaagtggtcaagaagaaaggcagcaaatacgagaagctgtctcagccggtcaagcag
actgccgtactgggtgctggcatcatgggtggcggtatcgcctaccagagtgccagcaaa
ggcactccgatcctgatgaaagacatcaaggacgatgccatcgagcttggcctgaaagag
gctcgcaaactgttttccaagcaggtagagcgcaagaagctcaccactgagcaaatggcc
gagaaactctccaacatccgcccgacgctctcttacggcgatttcggcaatgtcgatctg
gtggtcgaagcggtggtggaaaaccccaacgtcaaggatgcggtgctgaccgaagtagag
ggcatggtgggtgagaacacgattcttacctccaacacgtccaccatttcgatcaaccgt
ctggcgaagaacctcaagcgcccggaaaacttctgcggtatgcacttcttcaaccccgtg
caccgcatgccgctggtggaagtcattcgtggcgagaaaacctccgacgccgccgtggcc
gccaccgtggcttacgcccgcgccatgggtaaaacgcccatcgtggtcaacgactgccct
ggctttctggtcaaccgcgtactgttcccttacttcggcggcttcagcttcctggtagag
caaggggccgacttccagcgtgtcgataaggtcatggagaagtttggctggcccatgggc
ccggcctacctgctggacgtggtcggcatggataccgccgtgcacgccaacgaggtaatg
gccgaaggcttccctgaccgcatggcgcgtgaaggcaaaaccgccatccaggtgatgtat
gacaaccagcgcctgggccagaagaacgacaagggcttctacgcctacgaagaggacaag
aagggcaagccgaagaaggtcagcgatgagcaggcccatgccctcgtgaaagacgtcgtg
aaagagcagaaagagttttccgacgaagacatcgtggcgcgcatgatggtgccgctgtgc
ctggagaccgtacgttgcttggaagacggcatcgtcgagacgcccgcagaagccgatatg
gcactgatttacggcattggcttcccgcccttccgcggtggcgcgctgcgttacatcgat
gcgctgggcgtggccgagttcgtcgccctggccgaccgtttggccgaagagttgggaccg
ctctacgcacctaccgagaaactgcgcgccatggccaagaacaacgagcagttctatgcc
ggttccagcgccggtgctcaggcctaa
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