Halomonas hydrothermalis: CLM76_14385
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Entry
CLM76_14385 CDS
T05117
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
hhh
Halomonas hydrothermalis
Pathway
hhh03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hhh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CLM76_14385
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hhh03400
]
CLM76_14385
Enzymes [BR:
hhh01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
CLM76_14385
DNA repair and recombination proteins [BR:
hhh03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CLM76_14385
Prokaryotic type
CLM76_14385
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
DUF294
Motif
Other DBs
NCBI-ProteinID:
ATH78698
LinkDB
All DBs
Position
3071768..3072451
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AA seq
227 aa
AA seq
DB search
MSTPLPNDWQQWLGQEFKADYMSALKAFLAQEKAAKKVIYPHSSHWFRAFELTPLASVKV
VILGQDPYHGPNQAHGLCFSVQPGVPVPPSLVNIYKELAADVGFTPVRHGFLEPWAKQGV
LLLNTALTVEQGNAASHRGKGWESFTDRAIETVSQHGEPCVFLLWGSHARQKKALIDTQR
HLVLESPHPSPLSAHRGFFGNHHFSKANQFLQQQGRAPIMWQLPEKP
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
atgtcgactccgctacccaatgactggcaacagtggctggggcaagagttcaaggccgac
tacatgtcggccttgaaagcctttctggctcaggaaaaagcggccaagaaggtcatttat
cctcattcgtcccactggtttcgtgcgttcgagctgaccccgctggcctcggtcaaggtg
gtcattctcggtcaggacccctaccacggccccaaccaggcacatggcctgtgtttttcg
gtgcagccaggggtgccggtgccgccgtcgctggtcaacatctataaagagttggcggcg
gacgtaggttttacaccggtgcgccatggcttcctggaaccctgggccaaacagggcgtg
ttgttgctgaacactgcgctgaccgtggagcagggcaatgcagcgtcgcatcgcggcaag
ggctgggagtcgttcaccgaccgggccatcgaaaccgtcagccagcacggcgagccctgt
gtatttctgctctggggcagccatgcccgccagaagaaagcgctgatcgatacccagcgc
catttggtactggagtcgccccatccttcgccactgtcggcacaccgtggtttcttcggt
aatcaccatttttccaaggcaaatcagttcctccagcagcagggccgtgcgcctattatg
tggcaattgccggaaaagccttaa
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