Vreelandella venusta Y2: CLM76_15440
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Entry
CLM76_15440 CDS
T05117
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
hhh
Vreelandella venusta Y2
Pathway
hhh03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
hhh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CLM76_15440
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hhh03400
]
CLM76_15440
DNA repair and recombination proteins [BR:
hhh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CLM76_15440
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CLM76_15440
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
AAA_22
DUF87
Kinesin
UB2H
SWI2_SNF2
Microtub_bd
Motif
Other DBs
NCBI-ProteinID:
ATH78901
LinkDB
All DBs
Position
complement(3299631..3301655)
Genome browser
AA seq
674 aa
AA seq
DB search
MSKEFRLQSKFKPAGDQPTAIRSLVSGLESGLAHQTLLGVTGSGKTFTMANVVQQLQRPT
IVMAPNKTLAAQLYGEFKSFFPDNAVEYFVSYYDYYQPEAYVPSSDTFIEKDASINDHIE
QMRLSATKALLERRDALIVVSVSAIYGLGDPDQYLKMRLHFTRGELIDQRAFLRRLAELQ
YTRNDMDFRRGTYRVRGDVIDIFPADADEEAVRVELFDDEIDSIRLFDPLTGDIRGQVPR
MTIYPKSHYVTPRETILEAIDAIKGELKERLEWLRKHERLVEAQRLEQRTLYDIEMMLEL
GYCNGIENYSRYLSGRAPGEPPPTFFDYLPDDALLFIDESHVSVPQVGGMYKGDRSRKET
LVEYGFRLPSALDNRPMKFEEWESISPQTIFVSATPGPYEAEHAGQVVEQVVRPTGLLDP
QIEVRPASTQVDDLLSEIGLRTAVGERVLVTTLTKRMAEDLTDYLDEHDIRVRYLHSDID
TVERVEIIRDLRLGKFDVLVGINLLREGLDIPEVSLVAILDADKEGFLRAERSLIQTIGR
AARNANGKAILYGDRITDSMRKAIDETERRRAKQMAHNEEHGITPTTVTRSVADILEAAQ
TPGKKSSRRRGNERKVAEPEGSYDVASMSRQDLLAAISKLEDAMFEAAQNLEFEEAARLR
DQVHRMKEQQLALG
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaggaatttcgtctgcagtcaaaattcaagcctgcgggcgaccagcccaccgcg
atccgcagcctggtaagcggcctggagtcgggtctggcccaccagacactgctgggcgtg
accggctccggcaagaccttcaccatggccaacgtggtgcagcagctacagcggccgacc
atcgtcatggcgcccaacaagacgctggcggctcagctgtacggcgaattcaagtcgttc
tttcccgataacgccgtcgaatatttcgtctcctactacgactactatcagccggaagcg
tacgtgccttcctctgacacgttcatcgaaaaagatgcctcgatcaatgatcacatcgag
cagatgcggctgtccgccaccaaggcgctgctggaaaggcgtgatgccttgatcgtcgtg
tcggtatcggcgatctatggtctgggtgacccggatcaatacctgaaaatgcgcctgcac
tttacccgcggcgagctgatcgatcagcgtgccttcctgcgccgattggcggagctgcag
tacacgcgcaacgacatggattttcgtcgcggcacctaccgtgtgcgaggcgatgtaatc
gatatctttccggcggacgccgacgaagaggccgtacgggtcgagctcttcgacgatgag
atcgactccattcgcctgtttgacccgctgacaggggatatacgtggccaggtgccgcgc
atgactatctacccgaagtcgcactatgtcacccccagggaaaccatcctggaggccatc
gatgccatcaagggggagctgaaagagcggctcgagtggctgagaaagcatgagcggctg
gtggaagcccagcgcctggaacagcgcactctctacgacatcgaaatgatgctggagctg
ggttactgcaacggcatcgaaaactactcgcgctacttgtctggccgtgctcctggcgag
ccgccgccgacatttttcgattacctgcccgacgatgcgctgctcttcatcgatgagtcc
cacgtcagcgtgccccaggtgggtggcatgtacaaaggtgaccgctcccgcaaggaaacg
ctggtggagtacggcttccgcctgccttccgcgctggacaaccggccgatgaagttcgaa
gagtgggagtcgatttcgccacagaccatcttcgtatcggccaccccggggccttatgaa
gcagagcatgccggtcaggtggtcgaacaggtggtgcgccccacggggctgctcgatccg
caaatcgaagtgcgccctgccagcacccaggtcgacgatctgctgtccgaaatcggcttg
cgcaccgcagtgggcgagcgcgtgctggtgaccacgctgaccaagcgtatggccgaggat
ttgaccgactatctcgatgaacacgatattcgggtgcgctacctgcactccgatatcgac
actgtcgagcgggtggaaatcatccgcgatctacggctgggcaagttcgatgtgctggtg
gggatcaacctgttgcgcgaagggctggatattccagaagtgtcgctggtcgccattctg
gacgcggacaaggagggcttcctgcgcgccgagcgttcgctgatccagactattggccgc
gcggcgcgtaacgccaatggtaaagcgattctctacggtgaccggattaccgactcgatg
cgcaaggccatcgacgaaaccgagcgccgccgcgccaagcagatggcccataacgaagag
catggcatcacgccgaccaccgtgacgcgttcggtggccgacattctcgaagccgcccaa
acgcccggcaagaagagctcccgccgacgtggcaacgagcgcaaggtggccgagcctgag
ggtagctatgacgtggcgtccatgagtcgccaagacctgctggcggccatcagcaagttg
gaagacgccatgttcgaggccgcccagaacctggagttcgaagaggcggcaagattgcgt
gatcaggtgcaccgcatgaaagaacagcagctggcgctggggtag
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