Vreelandella venusta Y2: CLM76_16435
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Entry
CLM76_16435 CDS
T05117
Name
(GenBank) 23S rRNA pseudouridine(2604) synthase RluF
KO
K06182
23S rRNA pseudouridine2604 synthase [EC:
5.4.99.21
]
Organism
hhh
Vreelandella venusta Y2
Brite
KEGG Orthology (KO) [BR:
hhh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hhh03009
]
CLM76_16435
Enzymes [BR:
hhh01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.21 23S rRNA pseudouridine2604 synthase
CLM76_16435
Ribosome biogenesis [BR:
hhh03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
CLM76_16435
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
SYY_C-terminal
S4_2
Motif
Other DBs
NCBI-ProteinID:
ATH79083
LinkDB
All DBs
Position
complement(3508966..3510009)
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AA seq
347 aa
AA seq
DB search
MPLRTSTRINKYISESGLCSRREADRFVEQGNVYINGRRATTGDQVVAGDRVKVNGQEIE
PQEEEDLVLIALNKPVGIVSTTESAEKDNIVEFVKHGTRIFPIGRLDKDSQGLIFLTNNG
DLVNKILRANNHHEKEYVVTVDKPITDEFIAGMQGGVPILGQVTKKCRVVKESTFVFNIT
LVQGLNRQIRRMCEYFGYEVTQLVRTRIMNVSLKGLALGDWRDLTPREIETIIALTETSQ
AAPEKKKSDRPDYSGNRHGAKGKPPAAKKASPGARSGGKNRQDAKGKVAASGKPGAKAKP
TGKPAAKGKGRPGSKPGGKPGAGKSAIKGGRPGGGRTAAGKPSSRRK
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atgccgttaagaacctctacccgtatcaacaagtacatcagtgaaagcggcctgtgctcc
cgccgcgaagccgaccgcttcgtggagcagggcaatgtctatatcaacggtcgccgggcc
accacgggggatcaggtggtggcgggagatcgggtcaaggtgaacggccaggagatcgaa
ccgcaggaagaagaagacctggtattgatcgcgctgaacaagccggtgggcatcgtcagc
accacggagtctgccgagaaggacaacatcgtcgagttcgtcaagcacggcacgcgtatc
tttcccatcggacggctggacaaggactcccagggcctgatctttctcaccaacaacggc
gacctggtcaacaagattctgcgcgccaacaatcatcacgagaaagagtacgtggtgacg
gtggataagccgatcaccgatgagttcattgccggtatgcagggcggggtgcccattctt
ggccaggtgaccaaaaagtgtcgcgtggtcaaggagtctactttcgtcttcaatattacg
ctggtgcaggggctgaatcgtcaaattcgccgtatgtgcgaatacttcggttacgaagtg
acgcaactggtgcgtacacgcatcatgaacgtctccctgaaaggcctggcgctgggcgac
tggcgcgatctgacgccccgtgagatcgagaccatcattgccctgaccgaaacctcgcaa
gccgcaccggagaagaaaaaaagcgacaggcctgactacagcggcaacagacatggcgcg
aaaggtaaaccaccggcagcgaaaaaggcctcaccaggtgcccgttcgggtggcaagaac
cgtcaggacgccaagggaaaagtagccgcgtcgggtaagccaggcgccaaagcaaagcca
acgggaaaaccggctgccaaaggcaagggcaggcccggcagtaaacccggtggcaagccg
ggcgcgggcaagagtgccatcaagggtggtcgacctggcgggggcagaacagccgccggt
aagccgtcttcccggcgcaaatag
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