Halomonas hydrothermalis: CLM76_16455
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Entry
CLM76_16455 CDS
T05117
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
hhh
Halomonas hydrothermalis
Brite
KEGG Orthology (KO) [BR:
hhh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hhh03009
]
CLM76_16455
Enzymes [BR:
hhh01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
CLM76_16455
Ribosome biogenesis [BR:
hhh03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
CLM76_16455
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
TRM5-TYW2_MTfase
TRAM
Methyltransf_25
Methyltransf_11
SAM_MT
RrnaAD
Methyltransf_23
FtsJ
DNA_methylase
Methyltransf_15
Methyltransf_31
Tt1218-like
DREV
Motif
Other DBs
NCBI-ProteinID:
ATH79087
LinkDB
All DBs
Position
complement(3516093..3517532)
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AA seq
479 aa
AA seq
DB search
MAMLGKRRPPRPASGHSGLARTPSGRAAKEQTGELSGAPLVVERLAHDGRGVAHNAAGKT
VFIDRVLPGEEVEVAVHVTRKRFDESHVKTLLTPSPLRVTPPCAHFGQCGGCDLQHMALD
TQRHHKREVVAELLARQGLAHDAIGLLHGQTTAYRRRARLGVKVDSQGKVHLGFRAASTH
RLVDIDACPVLVPALQALIAPLRALLASLEAPRLVGHLELLATPDATVVLVRQLKAQPDD
ELRWQRFAEQHQVHVGAWLGREAPQLHWYGAPPLLRERVDMQALGIDASTLPSSLSLDFA
PGDFLQVNAEVNQQMVAQVVGWLAPKPGMVLLDLFAGIGNFSLPLAAAGARVHAVEGSQG
MVERLRDNAHNARDADAVLAVSAEQADLSNAEAVAKVLRQHPVDALVLDPPRSGAEAVCQ
ALGRHRIAKIAYISCDPATLARDAAHLVHAGYAIKHVVVADMFVHTAHMETLMLFEYTG
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atggccatgttgggtaagcggcggcctccacgccccgcctcgggccattcgggcctggca
cgcacgccaagtgggcgagccgcaaaagagcagactggcgagctctccggtgcgccgctg
gtcgtcgagcggctggcccatgatggccgaggggtggcccacaacgctgccgggaagacc
gtgttcatcgaccgggtgctgcccggcgaggaagtggaggtcgcggtccatgtgacccgc
aaacgcttcgatgagtcgcatgtcaaaactctgctgactccctcgcccctgcgcgtgacg
ccgccctgtgcccactttggccagtgcggggggtgcgatttgcagcatatggcactcgac
acccagcgccatcacaaacgggaggtggtcgctgagctgctggcacggcagggcctggcc
catgatgccatcggcttgctccacgggcagaccacggcgtatcgccgtcgggcgaggctg
ggtgtcaaggtggatagccagggcaaggtgcacctggggtttcgcgccgccagcacgcat
cggctggtagatatcgacgcctgtccagtgctggtgcctgccttgcaggcgctcattgcc
cctctgcgagcgctgttggcgagcctggaagccccgcgcttggtcggccacctcgaactg
ctggcgaccccggatgcgacggtagtgctggtgcgtcagttgaaggcacagcctgacgat
gagctgcgctggcagcgtttcgctgagcagcaccaggtacatgtcggtgcctggctgggg
cgcgaagcgccccagctgcactggtatggtgcgccacctttgctgagagagcgcgttgac
atgcaggcgctgggcatcgacgccagcacactgccatccagcctgtcgcttgactttgcg
ccgggagattttttgcaggtcaatgccgaggtgaaccagcagatggtggcacaagtggta
ggctggttggcgcccaagcccggcatggtgctgctggatctgtttgccggtatcggcaat
ttcagcctgccgttggccgctgcaggcgctcgcgttcatgcggtcgaagggagccaaggc
atggtcgaacggctgcgcgacaatgcccataacgcccgcgatgccgatgcagtcctggcg
gtcagcgcggaacaagcggatctcagcaatgccgaggccgtggccaaggtgctgcggcag
caccccgtggatgcgctggtgctggacccgccgcgtagcggtgccgaggcggtgtgtcag
gcgctgggccgccatcgcattgccaagatcgcgtatatctcctgcgacccggcaaccctg
gctcgcgatgcggcacatcttgtgcatgcagggtatgctatcaagcacgttgtcgtggcc
gacatgttcgtacatacggcgcacatggaaacgctgatgctatttgaatatacgggctag
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