Haloarcula hispanica ATCC 33960: HAH_0056
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Entry
HAH_0056 CDS
T01597
Symbol
tfb1
Name
(GenBank) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
hhi
Haloarcula hispanica ATCC 33960
Pathway
hhi03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hhi00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
HAH_0056 (tfb1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hhi03021
]
HAH_0056 (tfb1)
Transcription machinery [BR:
hhi03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
HAH_0056 (tfb1)
Prokaryotic type
Archaeal type
TFB
HAH_0056 (tfb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
BRF2-like_C_cyclin_rpt
RB_B
DUF8054_C
Motif
Other DBs
NCBI-ProteinID:
AEM55689
UniProt:
G0HQ90
LinkDB
All DBs
Position
I:complement(52590..53450)
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AA seq
286 aa
AA seq
DB search
MSTTVTQCPECNGSVKQQGVESVCGSCGLVVGEDAIDPGPEWRSFDDDDTDRARTGAPLT
RSRHDRGLSTKIGRSTRLKGRKRRQFARLRREHNRAQISSKRERNKVYAFTEIRRIISSM
SLSDAIRDRACVLFESAQNEDLLQGRTLEGFAAAAIYATCRTEGVARTVDELCTVAKATQ
SELRAAYDALNRELGLPTGPIDPREYVPRFATTLDLPTAVRQRAEQLVDEAQDRGLVSGR
NPAGVAAACLYTAAQERDVALTQAEAAETADVTPVTLRGTYTELQE
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgagcacgacggtaacgcaatgtccggagtgtaacgggtcggtcaaacagcagggtgtc
gagtcggtctgtggcagctgtggactggtcgtcggcgaggacgccatcgaccccggaccg
gagtggcggtcgttcgacgatgacgacactgaccgggcacgcacaggcgcgccattgaca
cggtcgcgtcacgaccgcggcctctcgacgaaaatcggccggtcgacacggctgaaaggg
cgcaagcgccgtcagttcgcccgcctccgccgcgagcacaaccgcgcacagatcagctcg
aaacgcgagcgaaacaaggtgtacgccttcaccgagatccggcgtatcatcagttcgatg
tcgctctcagacgcgattcgggaccgggcctgtgtgctgttcgaatccgcacagaacgag
gatctgctgcagggacggacgctggaagggtttgcggccgcggccatctacgccacctgc
cggaccgaaggtgttgcccggaccgtcgacgagctctgtaccgtcgccaaggcgactcag
tcggagcttcgcgcggcctacgacgctctgaacagggagctcgggctgccaaccggtccg
attgacccacgcgagtacgtccctcggttcgcgacgacgctggacctgccgacggcggtc
cgccagcgcgcggaacagctcgtcgacgaggcacaggaccgcgggctggtcagcgggcgc
aatccggccggcgtcgcggcggcgtgtctctacaccgcggcccaggaacgggacgtggcg
ctcacgcaggccgaggcggcagagacagcggacgtaacgccggtcacgctacgtgggacc
tacaccgagctacaggaatag
DBGET
integrated database retrieval system
