Haloarcula hispanica ATCC 33960: HAH_0109
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Entry
HAH_0109 CDS
T01597
Symbol
rpoE''
Name
(GenBank) DNA-directed RNA polymerase subunit E''
KO
K15171
transcription elongation factor SPT4
Organism
hhi
Haloarcula hispanica ATCC 33960
Pathway
hhi03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
hhi00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
HAH_0109 (rpoE'')
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hhi03021
]
HAH_0109 (rpoE'')
03019 Messenger RNA biogenesis [BR:
hhi03019
]
HAH_0109 (rpoE'')
Transcription machinery [BR:
hhi03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
HAH_0109 (rpoE'')
RNA polymerase I system
HAH_0109 (rpoE'')
Messenger RNA biogenesis [BR:
hhi03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
HAH_0109 (rpoE'')
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spt4
DUF7129
zf-DPOE
Motif
Other DBs
NCBI-ProteinID:
AEM55742
UniProt:
G0HQE3
LinkDB
All DBs
Position
I:99264..99461
Genome browser
AA seq
65 aa
AA seq
DB search
MADRLVCRDCHRVQGAEIESQCEACGGTALTEDWAGYVVIAHPERSDIAEEMEVTEPGKY
ALKVR
NT seq
198 nt
NT seq
+upstream
nt +downstream
nt
atggcggaccgactcgtctgtcgcgactgtcaccgcgtccagggcgcggaaatcgaaagc
cagtgcgaggcctgtggcggcaccgcactgaccgaggactgggccggctacgtcgtcatc
gcgcacccggagcggtccgacatcgctgaggagatggaagtgaccgagccgggcaagtac
gcgctgaaagtccgctaa
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integrated database retrieval system
