KEGG   Haloarcula hispanica ATCC 33960: HAH_0346
Entry
HAH_0346          CDS       T01597                                 
Symbol
recJ1
Name
(GenBank) RecJ-like exonuclease
  KO
K07462  single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
hhi  Haloarcula hispanica ATCC 33960
Pathway
hhi03410  Base excision repair
hhi03430  Mismatch repair
hhi03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:hhi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    HAH_0346 (recJ1)
   03430 Mismatch repair
    HAH_0346 (recJ1)
   03440 Homologous recombination
    HAH_0346 (recJ1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hhi03400]
    HAH_0346 (recJ1)
DNA repair and recombination proteins [BR:hhi03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    RecJ
     HAH_0346 (recJ1)
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     HAH_0346 (recJ1)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      HAH_0346 (recJ1)
SSDB
Motif
Pfam: DHH_CID DHHA1 DHH
Other DBs
NCBI-ProteinID: AEM55972
UniProt: G0HSE6
LinkDB
Position
I:325075..326538
AA seq 487 aa
MTTTGPVPALADRAAACADRLRAADRVLLASHIDADGLTSAAIATAALSRAGIPVETVFK
KQLDAAEIESIAAREYDTVLFTDFGSGQLDVISEHVAAGNFEAIIADHHQPSAPDDCHSD
AVVDTDGYADFETHLNPLLEGINGASELSGAGAAYVLARALSTGETDNRDLAALAVVGAV
GDMQAVGGELVGANAGLVEEGIAADVLEEGTDLSLYGKQTRPLPKLLEYATEVPIPGISN
DQAGATRFLEGLGLDLKADGDWRTWADLSDDERQTVASGLVQRAVERGVPADKIETLIGT
TYTLTAEPRGTELRDASEFSTLLNATARYERADVGLAVCLGERDAPLERARTLLSNHRRN
LSEGLTLVKERGVTQAGTVQWFDAGDAIRETIVGIVAGMALGTDGVDSDKPIIAFASTDE
DETKVSSRATGPLVGRGVDLSVVMRDAAQAVGGDGGGHDIAAGATIPTGEESAFIEAADE
IISEQVS
NT seq 1464 nt   +upstreamnt  +downstreamnt
atgactacgaccggccccgttccagcgctcgccgaccgcgcggccgcctgcgccgaccga
ctccgggcggccgaccgcgtgttgctggcctcccacatcgacgccgacgggctgaccagc
gccgccatcgccaccgcggcgctgtcgcgggccggcatccccgtcgagaccgtgttcaag
aagcaactcgacgccgctgagatcgagagcatcgcggctcgggagtacgacaccgtgctg
ttcacggacttcgggtccggccagctcgacgtgatctccgaacacgtcgccgcgggcaac
tttgaggcgatcattgccgaccatcaccagccgtcggccccggacgactgccactccgac
gcggtcgtcgacaccgacggctacgccgacttcgagacgcatctcaatccgctactcgaa
ggtatcaacggcgcgtcggagctctcgggtgcaggcgcagcgtacgtccttgcccgcgcg
ctctcgaccggggagactgacaaccgcgacctcgccgcgctggcggtcgtcggcgcagtc
ggggacatgcaggccgtcggcggggaactcgtcggagccaacgccggtctcgtcgaggag
ggcatcgccgccgacgtgctggaggagggcaccgacctctcgctgtatggcaaacagacc
cgaccgctgccgaagctacttgagtacgccacggaagttccgattccagggatttcgaac
gatcaggctggcgcgacgcggttcctcgaaggcctcggtctggacctgaaagccgatgga
gactggcggacgtgggcggacctctccgacgacgagcgccagaccgtcgccagcgggctg
gtccagcgtgccgtcgagcgcggcgtcccggcggacaagatcgagacgctcatcggcacg
acctacacgctgactgcggaaccgcgcggcacggaactccgggatgcgagcgagttctcg
acgctcctgaacgccacggcccgctacgaacgagcggacgtgggactggcggtctgtctc
ggcgagcgcgacgcaccgctggagcgggcgcggacactgctgtcgaaccaccgccggaac
ctctcggagggactcacgctcgtcaaggagcgcggcgtcacccaggccgggaccgtccag
tggttcgacgccggtgacgccatccgcgagaccatcgtcggcatcgtcgccgggatggcg
ctggggaccgacggcgtcgattcggacaagccaatcatcgcctttgccagcaccgacgag
gacgagacgaaagtgtcctcgcgggcgaccggcccgctggtcggccgaggcgtggacctc
tcggtcgtgatgcgcgacgccgcccaggccgtcggtggcgatggcggcgggcacgacatc
gcagcgggcgcgactatcccgaccggcgaggaatcagcgttcatcgaggcggccgacgag
attatcagcgagcaagtctcgtaa

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