Haloarcula hispanica ATCC 33960: HAH_1348
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Entry
HAH_1348 CDS
T01597
Symbol
nusG
Name
(GenBank) transcription antitermination protein NusG
KO
K15172
transcription elongation factor SPT5
Organism
hhi
Haloarcula hispanica ATCC 33960
Pathway
hhi03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
hhi00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
HAH_1348 (nusG)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hhi03021
]
HAH_1348 (nusG)
03019 Messenger RNA biogenesis [BR:
hhi03019
]
HAH_1348 (nusG)
Transcription machinery [BR:
hhi03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
HAH_1348 (nusG)
RNA polymerase I system
HAH_1348 (nusG)
Messenger RNA biogenesis [BR:
hhi03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
HAH_1348 (nusG)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spt5-NGN
KOW
Ribosomal_uL24m-like
KOW4_SPT5
DUF6093
SH3_KIN17_C
KOW2_Spt5
Motif
Other DBs
NCBI-ProteinID:
AEM56962
UniProt:
G0HQG6
LinkDB
All DBs
Position
I:complement(1296772..1297209)
Genome browser
AA seq
145 aa
AA seq
DB search
MGIYAVKTTASQERTVADMIISREEDEIHAALAPDSLTSYVMVEADDHNVFDRILDEIPH
ANGVVQGESSMAEVEHFLSPKPDVEGIAEGDIVELIAGPFKGEKAQVQRIDEGKDQVTVE
LYEATVPIPVTVRGDQIRVLDSEER
NT seq
438 nt
NT seq
+upstream
nt +downstream
nt
atgggaatctacgcagtcaaaaccacggccagccaggaacgcaccgtcgcagacatgatc
atctcccgcgaggaagacgagatccacgccgcgctcgcgccggactcgctcacgagctac
gtgatggtcgaagcggacgatcacaacgtcttcgaccgcatcctcgacgagatcccccac
gccaacggcgtcgtgcagggggagtcctcgatggcggaagtcgagcacttcctctcgccg
aaaccggacgtggaaggcatcgcggagggcgacatcgtcgaactcatcgccggcccgttc
aagggcgagaaggcgcaggtccagcgcatcgacgagggcaaggaccaggtcaccgtcgaa
ctgtacgaggcgacggtcccgattccggttaccgtgcgtggtgaccagattcgagtgctg
gactccgaagagcggtag
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