Haloarcula hispanica ATCC 33960: HAH_2290
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Entry
HAH_2290 CDS
T01597
Symbol
truD
Name
(GenBank) tRNA pseudouridine synthase D
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
hhi
Haloarcula hispanica ATCC 33960
Brite
KEGG Orthology (KO) [BR:
hhi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hhi03016
]
HAH_2290 (truD)
Enzymes [BR:
hhi01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
HAH_2290 (truD)
Transfer RNA biogenesis [BR:
hhi03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
HAH_2290 (truD)
Prokaryotic type
HAH_2290 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
AEM57878
UniProt:
G0HWZ5
LinkDB
All DBs
Position
I:complement(2203992..2205374)
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AA seq
460 aa
AA seq
DB search
MQAAHPIERAVGMEYYVSDADGVGGHLRASPADFRVRELEAFGTEPVDADTGAYPHLVFR
AELRNWETNDFASKLSDRLGISRERVSWAGTKDKRAVTTQLFSVKGVAAEDLPEIGGTDI
EVIGRAGRPILFGDLAGNAFEIVVRDTENTDNAASVVADLQAFASGEDPTGDRARSSDAT
LPDGDTTVGVPNYFGQQRFGSRRPVTHEVGLAIARGEWKNAVLAYVGNPDEREPESTQEA
RAYVDETHDWAGALDRLPGALGYERSICHRLVENGASEPADFREALEALPSNLQSLFVNA
AQSYVFNRILSERLERGLPFDRPVEGDIVCFRDSDAPEAFPIPDADRTQEVTAKRLSTVE
RHCERGRAFVTAPLVGTDTELGSGEPGDIAREVLDDVGLEQGDFDLPGAFDSDGTRRAIL
LRTDLGVERDDADLTFSFSLPKGSYATVLLREFRKGDPNA
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgcaagcggcccacccaatcgagcgagcggtcggtatggagtactacgtcagcgacgcc
gacggggtgggcggccacctccgcgcttcccctgcggacttccgggttcgggaactggag
gcgttcggcaccgaaccggtcgacgccgacaccggggcgtatccgcatctcgttttccgg
gcggagcttcgtaactgggagaccaacgactttgccagcaaactctccgacaggctgggt
atctcccgcgagcgggtgtcgtgggcgggaacgaaagacaagcgcgcggtcacgacccag
ttgttctcggtaaagggagtcgcagccgaggacctgccggagatcggcggcacggacatc
gaggttatcggccgcgccggccgccccatcctcttcggcgatctggcgggcaatgccttc
gagattgtcgtccgggacaccgagaacaccgacaacgccgccagcgtggtggccgacctg
caggcgttcgccagcggagaggacccgacgggggacagggcccggtccagcgacgccacg
ctgccagacggcgacacgacggtcggcgtccccaactacttcggccagcagcggttcggg
tctcgccggccggtcacccacgaggtcgggctggccatcgcccgcggcgagtggaagaac
gcagtcctcgcctacgtcggaaacccggatgagcgcgaaccggagtcgacgcaggaggcg
cgagcatacgtcgacgaaacccacgactgggccggcgcgctggacaggctgcccggcgcg
ctgggctacgagcgctccatctgtcaccggctggtcgagaacggagccagcgagccggcg
gatttccgcgaggcactggaggcgctgccgtcgaacctccagtcgctgttcgtcaacgcc
gcccagtcgtacgtcttcaaccgcatcctttccgagcggctggaacggggcctccccttc
gaccggcccgtggaaggcgacatagtctgtttccgtgacagcgacgcgcccgaggccttc
ccgattccggacgccgaccgcacccaggaagtcactgccaagcggctgtcgaccgttgag
cgccactgcgagcgcgggagagcgtttgtcaccgcgccgctggtcgggaccgatactgag
ctgggcagtggcgaaccgggcgacatcgcccgtgaagtcctcgacgacgtcggcctcgaa
cagggcgacttcgacctccccggcgcgttcgacagcgacgggacgcggcgggccatcctg
ctccgaacggacctcggtgtcgagcgcgacgacgccgacctgacgttctcgttctcgctg
ccaaaggggagctacgcgacggtcctcctccgggagttccggaaaggcgacccgaacgcg
tag
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