Haloarcula hispanica ATCC 33960: HAH_2547
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Entry
HAH_2547 CDS
T01597
Symbol
tfb6
Name
(GenBank) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
hhi
Haloarcula hispanica ATCC 33960
Pathway
hhi03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hhi00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
HAH_2547 (tfb6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hhi03021
]
HAH_2547 (tfb6)
Transcription machinery [BR:
hhi03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
HAH_2547 (tfb6)
Prokaryotic type
Archaeal type
TFB
HAH_2547 (tfb6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Zn_ribbon_tTFIIB
Cyclin_C
Trm112p
Cas12f1-like_TNB
Auto_anti-p27
DZR_2
DUF1272
DZR
Sigma70_r4
Motif
Other DBs
NCBI-ProteinID:
AEM58133
UniProt:
G0HYE1
LinkDB
All DBs
Position
I:complement(2471315..2472334)
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AA seq
339 aa
AA seq
DB search
MTTRSIYSPDERDESADEQAESEASTGHACPDCGGSLVTDDSRGETVCEACGLVVDEDEI
DHGPEWRAFDSQERDNKRRVGAPTTEMKHDKGLSTNIGWQNKDAYGNSLSTRQREKMQRL
RTWDERFRTRDHAERNLKQALGEIDRMGSALGVPESARETASVIYRRALDEGMLPGRSIE
GMATAALYAAIRQSNLPQTLDDMAVVSRVDEMEFTRAYRYLNRELSLQVGPPDPATYLSK
FISELDADDALERQARALIEAGKEANVHSGKSPVGLAAAAIYAAGLLLGEEMTQETVSEA
TDISTVTIRERYRELLEAEAELDDSAVDATSGAESGASA
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgacgacacgcagcatctattcccccgacgaacgcgatgaaagtgcggacgaacaggcc
gagtccgaggcgagcactggccacgcctgcccggactgtggcggaagcctcgtcaccgac
gacagtcgcggcgagacggtctgtgaagcctgcggcctcgtcgtcgacgaggacgagatc
gaccacggcccggagtggcgcgccttcgacagccaggagcgcgacaacaagcgccgcgtc
ggtgccccgacgacggagatgaaacacgacaagggcctctcgaccaacatcggctggcag
aacaaggacgcctacggcaactccctgtcgacgcgccagcgcgagaagatgcagcgcctg
cggacctgggacgagcggttccgcacccgcgaccacgccgagcgcaacctcaagcaggcg
ctgggcgagatcgaccgaatggggagcgctctcggcgtccccgagagcgcccgcgagacg
gccagcgtcatctaccgccgtgccctcgacgagggaatgttgcccggtcgctccatcgaa
gggatggcgactgccgccctgtacgccgcaatcagacagtcgaacctcccacagacgctc
gacgacatggccgtcgtcagccgcgtcgacgagatggagttcacccgcgcgtaccgctat
ctcaaccgcgaactctcgctgcaggtcggcccgccggaccccgcgacctacctcagcaag
ttcatctccgaactcgacgccgacgacgccctcgaacgccaggcccgcgccctcatcgag
gcggggaaggaagcgaacgtccacagcggcaagagccccgtcggcctcgccgccgcggcc
atctacgccgccggcctgctgctgggcgaggagatgacccaggaaaccgtcagcgaggcc
acggacatcagcactgtgaccatccgcgagcgctaccgcgaactgctggaagccgaagcg
gaactcgacgacagcgccgtcgacgcgacgagcggcgctgaatccggtgcgagcgcctga
DBGET
integrated database retrieval system
