Hippoglossus hippoglossus (Atlantic halibut): 117751749
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Entry
117751749 CDS
T07778
Name
(RefSeq) phospholipid-transporting ATPase ABCA1-like isoform X1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip02010
ABC transporters
hhip04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
117751749
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
117751749
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hhip02000
]
117751749
Transporters [BR:
hhip02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
117751749
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
AAA_15
ABC2_membrane_2
AAA_23
Motif
Other DBs
NCBI-GeneID:
117751749
NCBI-ProteinID:
XP_034424521
LinkDB
All DBs
Position
18:9379947..9518666
Genome browser
AA seq
2236 aa
AA seq
DB search
MGLLTQFTLLLWKNFTLRKRQKVRLVIELIWPLFLFFILVWVRTTNKPIYKSQCHYPNKA
MPSAGVLPWLQGMICNINNPCLNYPTPGEAPGQVNNFNNSIIAGVLIELQSLVENRSILR
EAKLLADDIDQWSSVLSQSNPGNAQPVTLKNVLRDDETFSKHLKENLSVSPAVVESLLNA
TIYLNPERPGDLRTLLCDGTGLDEYVQFSSHAEKEAFQNVSCSLTRQQLINTQQVLRQNL
DVRKMLSEVPQSLGLNAADTVRLVGRTTQNALPVIEELSRLQNSMVFQAARSLNFQDDMI
GSINMLLCGNQPDSTNMTLSLRSPGQMDNNESISITGNSSDAFCQTLVDTLESTPGLRNI
WSSFKPLVQGKVLYTPDTPAARLMVNKANGTFQALATLKELADSWEELGPRIWDFFQNSS
QVNALRALLENPVFAAALDQRLNGTGWTAELLANFLYNGPPEDRPPGMPTNDWRDAFNAT
TQIMKLISNFLGCLDLNKFEAVPDESHLVSKALELLDNGTYWASVIFENLQPNSSQPPPY
VKYKIRMDVDEVERTNSVKERLWSPGARDNSFNDLRYIWGGFAYLQDMMDHGITKVQTSK
TQPLGVFAQQMPYPCFVDDVFIQSIGGILPMFLVLAFMYSVCMCIKSLVLEKELRLKEVL
RVVGIQNGALWFSRFTENIVLLAVPSLLISVMVKYGKVLQYSDPSVIFVFLLVFCMSTIT
QCFFISVFFSKANLAAACGGLIYFVLYLPHILCYAWRDIMGFGAKVAVSLLSCVAFGYGC
ENFSKYEEQGIGIQWHNINKSPEEGERYTFLLSIIMMLCDSLIYWILTWYIENVFPGQYG
IPKPWYFPFTASYWCGRASVTRVDTGDLRDYSLHNEYLEKPPPDMKAGVSVRNLVKIYKT
GKKLAVDGLTVDFYENQITSFLGHNGAGKTTTMSILTGLFPPTSGTALINGYDILTDMDR
IRKHLGMCPQHNVLFNELTVEEHIYFYARLKGHSREEVKSEMDQMIEDVGLPHKRKELAK
NLSGGMQRKLSVAIAFVGGSKIVILDEPTAGVDPYARRGIWELLLKYKQGRTIILSTHHM
DEADILGDRIAIISQGKMRCCGSSLFLKKSFGSGYYLTLVRDETEKMAAQRNGIIHSQAA
EEKDFPSRSSLDDGIGSQSWGSLDPSDLTAVGQLVRRHVPEAVFLESIGQEITYILPYSG
ARDGTFALLFKELDLAMADLGLTSYGISDTTLEEIFLKVAEDTGVDADIRTAVEPVERDC
ERSPRKSKRNSIASLHTTSAQPQQVSGMTELKERFTSKVEDLQRSSAVGGRGSTVITGWE
LIRRQFLALFIKRFHHARRSRKGVIAQVILPVLFVCMSLIFSLIVPPFAEYPSLELQPWM
NGLPQTTFYSNDGPDNVEVSQVVETLVNNPGFGTRCMDGNPLPMLPCSSSGSDWFTPPVD
QSVSDIFLNGNWSMSNPSPSCQCSTPKRTIMLPDCPPGAGGLPPPQRIQNTTDTLEDLTG
RNMSDFLLKTLEHSGKTRYGGVSVGGLNSQVRLTEGDIEVVFRDLRDLLGSFQDNVTDEL
LQKSESLLKKLGTRDNVKVWFYNQAFHGMVSFLGVANNAILRGNLPAGEDPRQYGISVSN
HPLNLTKTQLSFVAMATASSDVVVSICVIFAMSFIPASFVLFLIQERVNKAKHLQFVSGV
NPAVYWLANFAWDMCNYIVPCLIVILIFVAFQQKAYVSPPNLPALILLLIFYGWSITPMM
YPASFIFSVPSTAYVVLTCVNLFIGINGSVATFFMELYDDDSVSNINDIVKQVLLIFPHF
CLGRGLIDMAKNQAMATLFISFGEDRFEDPLSWDMVGKNLCAMSIQGVVMFAVTILIQYK
FFCKPRLISGKSLSAEEEDIDVARERERVYEGKAQNDLLKICDLTKVYSRKSTPAVDRLC
VGVPAAECFGLLGINGAGKTTTFKMLTGDIPVSGGEAVLNGYSIRTEMSEVHQNMGYCPQ
FDAIDDLLTGREHLEFYGRLRGVPEHEVAMVAEWGIQKLGLVKYSNKSAGTYSGGNKRKL
STAIALIGCPPVIFLDEPTTGMDPKARRFLWDCILSVIREGRSVILTSHSMEECEALCTR
MAIMVNGRFKCLGSIQHLKSRFGDGYTVIVRVGGSPPALKPVEDFVLQTFSGSVLKEKHH
NTLQYQLPYTQGALATIFSQFTIHQQRLGVEDYSVSQTTLDQVFVNFARHQHIEEEAQGY
DNPVDTSDEKPVAEKV
NT seq
6711 nt
NT seq
+upstream
nt +downstream
nt
atgggtctcctgacgcagttcactctgctcctgtggaagaacttcactctgcggaagaga
caaaaggtgcgactggtcattgaactcatatggcctctgtttctcttcttcatactggtg
tgggtgcggaccaccaacaagccaatttacaaaagccaatgtcactatccaaataaagcc
atgccgtcggccggcgtgctgccgtggcttcaaggtatgatctgcaacatcaacaacccc
tgtttgaactacccgacgcctggggaggcaccaggccaagtcaacaacttcaacaactcc
ataattgctggtgtgttgatagagctgcagagcctggtggagaacagatccattctcagg
gaggcaaagttgctggcggacgacatcgaccagtggtcctcagtcctgtcacagtcgaac
cctgggaatgctcaaccagtgaccctgaagaatgttctgcgagacgatgaaacgttctcc
aagcacctgaaagagaacttgtcggtgtcaccggcagttgtcgaaagcctcttaaatgcc
acgatttacctcaacccagaacgaccgggcgacctgaggacgctcctgtgcgacgggacc
ggtctggatgagtacgtccaatttagcagccacgctgagaaggaggcttttcaaaatgtc
agctgctccctcactcgacagcagctgattaacacccagcaagtgctccggcaaaacctg
gatgtgaggaaaatgctgtctgaggtgcctcaatctctgggcctgaatgcagcagatacc
gtgagactggtggggagaaccactcaaaatgctttacccgtgattgaggagctgtcgagg
ttgcagaactccatggtctttcaggcggcgcgttcattgaatttccaagacgacatgatt
ggcagtatcaatatgctgctgtgtggaaatcagcccgactccaccaatatgaccctcagt
ttacgctcacctggacaaatggataacaacgagtcgatctccattacgggcaacagttcc
gatgctttttgtcagacccttgtcgacaccctggagagcacacctggtctgcgcaacatt
tggagctcgttcaagcccttagtacaaggcaaagtcctctacacacccgacacacctgct
gcccgcctgatggtgaacaaagcaaatggcacattccaagccttggccacgttgaaggag
ctggccgattcgtgggaggagcttgggccccgcatctgggatttctttcaaaacagctct
caagtgaatgcattacgggctctgctggagaacccagtgtttgctgccgccctcgaccag
cgtctcaacggcacgggatggacggccgagctgctcgccaacttcctgtacaatgggccc
ccggaggatcgtccacctggaatgccgaccaacgactggagggacgctttcaacgccacc
actcagatcatgaagctcatctccaacttccttggctgtttagacctgaataagtttgag
gcagttcccgatgaaagccatctggtgagcaaagcactggagctcctggacaacggcacg
tactgggccagtgtcatctttgaaaacctgcagcccaactccagccagccccctccttat
gtcaaatacaagatccgcatggacgtcgatgaagtggagcgcaccaacagcgtcaaagaa
aggttatggtctcctggggcccgagacaattcctttaacgacctgcgctatatatgggga
ggcttcgcctacctgcaggatatgatggaccacggcattacaaaagtgcaaacgtcaaag
acccagcccctcggagttttcgcccagcagatgccatacccctgtttcgtggatgacgtc
ttcattcagagcattggaggcatcctgcccatgttcctggtgctggccttcatgtactcc
gtgtgcatgtgcatcaaaagcctggtgctggagaaggagctgcggctcaaggaggtgctg
cgcgtcgttggcattcagaacggcgccctctggttctcaaggttcacagagaacattgtt
ctgctcgcagttccctctttgctcataagtgtcatggttaagtacgggaaagtgctgcag
tacagcgacccctcggtgatcttcgtcttcctgctggtgttctgtatgtccaccatcact
cagtgcttcttcatcagcgtcttcttctctaaggccaacttggcggcggcgtgcggcggc
ctcatctactttgtcctctatctgccgcacatcctctgctacgcctggagggacatcatg
ggtttcggggccaaggttgccgtgagtttattgtcatgtgtggccttcggctacggctgt
gagaacttctccaagtacgaggagcaaggcatcggtatccagtggcacaacatcaacaag
agtccagaggagggtgaacgctacaccttcctactgtccatcatcatgatgctctgtgat
tccctcatatactggatcctcacctggtacattgagaacgtctttccaggccaatatgga
atccctaagccgtggtacttccctttcactgcgtcttactggtgtggcagagcctcagtg
acccgtgttgacaccggtgatttgagggactacagcctacataatgaatatctggagaaa
ccgccgcccgacatgaaggccggggtctcagtccgcaatcttgtcaagatctacaagacg
ggaaagaagctggccgtcgacggactgaccgtggacttctacgagaatcagatcacatct
ttcctcggccacaacggagccggaaaaaccaccacaatgtcaatcctgacaggactgttc
ccgcccacatcgggcaccgctctcatcaacggatacgacatcctcactgacatggacagg
atcaggaagcatttgggaatgtgcccacagcacaacgtcttattcaatgagctgacggtg
gaggagcacatctacttctacgcccggctgaaaggacacagccgcgaggaggtgaaaagt
gagatggaccagatgattgaggacgtcggtttaccacataagaggaaggagctcgctaag
aacctgtcgggcggcatgcagaggaagctttccgtggccatagcgtttgtcggaggctca
aaaatcgtcatcttggatgaaccgacggcgggagtggacccctacgcccgcaggggcatc
tgggaactgctgctcaaatacaagcaaggtcgcaccatcatcttgtccacgcaccacatg
gacgaggcggacatcttaggggaccgcatcgccatcatctcccagggcaagatgcgttgc
tgcggctcctcgctcttcttgaagaaaagctttggcagcggctactacctcaccctggtc
cgagacgagaccgagaagatggccgctcagcgtaacggtatcatccacagtcaggccgca
gaggagaaagacttcccttcgaggagcagccttgatgacggcatcggcagccagagctgg
ggcagcttagatccctcagatctgacagctgtgggtcaactcgtgcggcgccacgtcccc
gaggcggtcttcttggagagcatcggtcaagagatcacctacatactgccctacagcgga
gccagagatgggacctttgctctgctcttcaaagagctcgacctggccatggctgacctc
ggcctgaccagctacggcatctctgacaccacactggaggagatatttcttaaagtggca
gaagacacaggagtggatgcagacatacgaacagcagtggagccggttgagagagactgc
gagaggagcccccgcaaatccaagcgaaacagcatcgccagcctccacacaacatccgca
caaccacaacaagtctctgggatgactgagttgaaggaacgatttacaagtaaagtggaa
gacttgcagaggagcagcgcagtcggcgggaggggatccaccgtcatcaccgggtgggag
ctgatcaggaggcagttcctggcgctctttatcaagcgcttccaccacgcccgcaggagc
cgcaagggagtcattgcccaggtgatcctgcctgttttgttcgtgtgcatgtctctgatc
ttctcactcatcgtcccgccgttcgctgaatatcccagtctggagctgcagccctggatg
aacggcctgcctcaaaccacattttacagcaacgacgggccagataacgtggaggtgtct
caggtggtggaaacgctcgtgaacaatcctggatttgggactcgctgcatggatggaaac
ccgttaccgatgttgccatgttcctctagtggctctgactggttcactccacccgtagat
cagtcggtcagcgacatcttcctcaacgggaactggagcatgtccaacccctccccttcc
tgtcagtgcagcacgcctaaacggacgatcatgttgcccgactgtccccctggagcggga
gggctccctccacctcagaggatccagaacacgacagacacattggaggatctcaccgga
cggaacatgtcagacttcctactcaaaactttggagcactcgggtaaaacgaggtacggg
ggtgtatctgttggaggactcaactcacaagtccgtctcactgagggagatatcgaggtt
gtattcagggatctaagagacctgctcggttcatttcaggataatgtcactgatgaactc
ttacagaagtctgagtcgctgctgaagaagctgggaaccagggacaacgttaaggtgtgg
ttctacaaccaggcatttcacggcatggtgtctttcctcggtgtggccaacaacgccatc
ctgaggggaaacctgccggcgggagaggatccccgccagtacggcatctccgtgtccaat
caccccctcaacctcaccaagacgcagctctcctttgtggccatggccacagcctccagc
gacgtggtggtgtccatctgcgttatcttcgccatgtccttcatccctgccagcttcgtc
ctcttcctcatccaagagcgggtgaacaaagccaagcatctgcaatttgtcagcggcgtg
aacccggctgtgtactggttggccaattttgcctgggacatgtgtaactacatcgtcccg
tgtttgattgtgattctcatcttcgtcgcctttcaacaaaaagcctacgtctcgccccct
aacctgcctgcgctgattttgctgctcattttctatgggtggtccatcacccccatgatg
taccccgcctccttcatcttcagcgttcccagcacggcctacgtggtgctgacctgcgtc
aacctcttcatcggtatcaacggcagcgtggccaccttcttcatggagctctatgacgat
gatagcgtctccaacatcaatgacatagtgaagcaggtgctgctgatattcccacatttc
tgtctgggcagagggctgattgacatggccaagaaccaggcaatggccacgctcttcatc
agctttggggaggaccgtttcgaggatccactcagctgggatatggtgggaaagaatctc
tgtgccatgtccatccagggagttgtcatgtttgccgtcacaatcctcatccagtataag
ttcttctgcaaaccgaggcttatttctgggaagtcattatctgcagaggaggaggatatc
gatgttgcacgggagcgtgagcgagtgtacgaaggcaaagcccagaatgacctcctgaag
atctgtgacctcaccaaggtatactctcggaagagcacccccgctgtggacaggctatgc
gtgggcgtacctgctgcagagtgtttcggcttgctgggaatcaatggggctgggaaaact
accacgttcaagatgctgacaggagatatcccggtctctggtggagaggccgtcctaaat
ggatacagcatacggacggagatgagcgaggtgcaccagaacatgggctactgtccccag
tttgacgccattgatgacctgctcacaggacgggaacatctggagttttacggcaggtta
cgaggagtgccagagcacgaggtcgccatggtggcagagtggggaatccagaagttgggg
ctcgtcaaatattccaacaaatcggcagggacctacagcggtgggaacaagcgcaaactt
tccacggccatagccctgatcggctgtcctccagtcatctttctggatgagccgactact
gggatggatccgaaggcccgccgtttcttatgggactgcatcctgagtgtcatcagagag
ggacgctcagtcattctcacttcacacagcatggaggagtgcgaggccctgtgcacacgc
atggccatcatggtaaacggtcgcttcaagtgtctcggcagcatccagcatctgaagagc
agattcggagatggctacacggtgatcgtgcgggtggggggctctcctccggccttgaag
cccgtcgaggactttgtcctgcagaccttctcgggcagcgtcctgaaggagaagcatcac
aacacgctgcagtaccagctgccgtacacacagggagcactggccaccatcttcagccag
ttcaccatccaccagcagcggctcggtgtggaggactactctgtgtcacagaccactcta
gatcaggtgtttgtgaatttcgcgaggcaccagcacatcgaggaggaggctcagggctat
gacaacccggtggacacctcagatgagaagcccgtcgcagagaaggtgtaa
DBGET
integrated database retrieval system
