Hippoglossus hippoglossus (Atlantic halibut): 117751774
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Entry
117751774 CDS
T07778
Symbol
katnb1
Name
(RefSeq) katanin p80 WD40 repeat-containing subunit B1
KO
K18643
katanin p80 WD40 repeat-containing subunit B1
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
hhip04812
]
117751774 (katnb1)
Cytoskeleton proteins [BR:
hhip04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
117751774 (katnb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
Katanin_con80
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
WDR55
Beta-prop_EML_2
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_EML
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
Beta-prop_DCAF4
Beta-prop_SCAP
NBCH_WD40
WDR90_beta-prop_4th
Beta-prop_EIPR1
Beta-prop_SPT8
Beta-prop_IFT122_1st
Beta-prop_IFT140_1st
Beta-prop_Vps41
WD40_RFWD3
Beta-prop_RIG_2nd
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_WDR35_TULP_N
RMC1_N
PROPPIN
Beta-prop_RIG_1st
Beta-prop_IP5PC_F
Beta-prop_DCAF12
Beta-prop_LRRK2
Beta-prop_IFT140_2nd
Beta-prop_VPS8
Ge1_WD40
VPS8_N
WDR54
Beta-prop_IFT122_2nd
Motif
Other DBs
NCBI-GeneID:
117751774
NCBI-ProteinID:
XP_034424572
LinkDB
All DBs
Position
3:1974694..1983698
Genome browser
AA seq
695 aa
AA seq
DB search
MAAANSTKISWRLQEFEAHSSSVSCLALGQSSGRLLATGGEDCRVNIWAVSKANCIMSLT
GHKSPVECVQFNMSEEQVVAGSQSGSIRVWDLEAAKILRTLMGHKANITSLGFHPYGEFL
ASSSMDTNIKLWDVRRKAYVFKYMGHTEAVRSLVFSPDGKWLASASDDCTIKLWDLNLGK
TITEFKSHSGPVNIIQFHPNEYLLASGSSDRTVKLWDLEKFTMIGSMEGNTTPVRCVSFS
PDGTCLYSGGTDSLRVFGWEPDRCLDVVTVGWGKVSDLAVCNQQLIGVSHQLSSVSSYVV
DLKRVKKSGGSVIKGIIQDYQPLTEPKDPKGAALRKSYDRPATTCSSQRVKQRSDSERRS
PEGQRRSPSEDEAEEKVSSAEIHNAEDFKEIFQPKNAISRTPPKMSEPFPAPPEDETILA
IGRQLRDMTSLFPDKPQAPPLASSTPVQRVEPTVVSSAKHPSPSAVDPVDSHPPPAQPRV
TTAKTKPRPKIILSTRNEPIGLNVDDFLLTSPNNRPGALSDDEVLSQMRKGHDTMCVMLS
RRNMNLETVRAVWNREGVKSAMDAAVSMNDLSIVVDLLNILNLQPSLWKLDVCTTVLPQI
DKLLQSKYESYIQTGCTSLKLIMKHFWVLISDTLRATPSVGVDITREERHQKCRACCKQL
KNLSNIVKNKATQVGRHGSTFIELQLLLAPLDDSL
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atggctgctgccaactccaccaagatctcatggcgactgcaggagttcgaggctcactcc
agcagcgtctcctgtttggctctggggcagagctccggccgcctgctggccacaggtgga
gaggactgcagggtgaacatctgggctgtgagcaaagccaactgcatcatgagtttgact
ggtcacaagagcccggtggagtgtgtccagttcaacatgtcagaggagcaggtcgttgct
ggttctcagtccggatcgatacgagtctgggacctggaggctgcaaagattttaaggact
ctgatgggacataaagcaaacatcacaagtctgggcttccatccatatggagagttcctc
gcctccagctccatggacacaaacatcaagctgtgggacgttcgaaggaaagcatatgtg
ttcaaatacatgggtcacaccgaggccgtcagaagtctggtcttcagtcccgatgggaag
tggttggcttcagccagtgacgactgcaccatcaagttgtgggacctgaacctgggtaag
accatcacagagttcaaatctcactccggccccgtcaacatcatccagttccatcccaac
gagtacctgctggcttcaggcagctccgacagaactgtcaagctgtgggatctggagaaa
tttaccatgatcggttcgatggagggaaacacgactccagtcaggtgtgtaagtttcagt
ccggacggcacctgtctctacagcggcggtacagactctctgcgggtctttggctgggag
cctgaccgctgcctcgatgtggtgacggtcggctggggcaaagtctctgatctggcagtt
tgcaaccagcagctgatcggcgtgtctcaccagctctccagcgtgtcgtcgtacgtggtc
gatctcaagagggtgaagaagagcggcggctctgtgatcaagggaatcatccaggactac
cagccgctcacagagcccaaagatcccaaaggagccgcactgcgaaagagctacgacaga
ccggcgaccacctgcagctcacagagggtgaagcagaggtccgactctgagaggcggagc
cctgaaggtcagaggcggagccccagtgaggacgaggcagaggagaaggtgtcgtcagca
gagatccacaacgctgaagacttcaaggaaatctttcagcccaagaacgccatctctcgg
actcctcccaagatgtcggagccttttcctgctcctccagaagacgagacgatattggcc
atcgggcgccagctgagggacatgacgtctctgtttcctgacaagccgcaggctcctcca
ttggcgtcctcgactcctgtccagagggtggagcccaccgtcgtctccagtgcgaaacat
ccgtccccgtcagcagtggaccccgtggactcccacccccctcccgctcagcctcgcgtc
accacagcgaaaaccaaaccacgacctaaaatcatcctgagcaccaggaacgagcccatc
ggactcaacgtggacgacttcctgttgacgtcacccaacaacagacctggagctctgagc
gacgacgaggttctgtctcagatgagaaaaggtcacgacaccatgtgtgtgatgctgagc
agacgcaacatgaacctggagacggtccgagccgtgtggaaccgagagggcgtcaagagc
gccatggacgccgctgtctccatgaatgacttgtccatcgtcgtggacctcctcaacatt
ctcaacctccagccgtctttgtggaaactggatgtttgtacgacggttcttcctcagatc
gacaaactgctgcagagtaaatacgagagctacatacagactggctgcacgtctctgaag
ctcatcatgaaacatttctgggtgttgatctcggacacactgagggcgacgccgtcggtc
ggagtcgacatcacacgagaggagcgacaccagaagtgccgagcgtgctgcaagcagctg
aagaacctcagcaacatcgtgaagaacaaggcgactcaggtcgggcgacacggcagcacc
ttcatcgagctgcagctgctcctggcgccgctcgacgactcgctctga
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