Hippoglossus hippoglossus (Atlantic halibut): 117751809
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Entry
117751809 CDS
T07778
Name
(RefSeq) ras-related protein Rab-39B
KO
K07925
Ras-related protein Rab-39B
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
117751809
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hhip04131
]
117751809
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
hhip04031
]
117751809
Membrane trafficking [BR:
hhip04131
]
Autophagy
Other autophagy associated proteins
Rab GTPases
117751809
GTP-binding proteins [BR:
hhip04031
]
Small (monomeric) G-proteins
Rab Family
Rab39/42 [OT]
117751809
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
MMR_HSR1
Gtr1_RagA
GTP_EFTU
AAA_22
TniB
Motif
Other DBs
NCBI-GeneID:
117751809
NCBI-ProteinID:
XP_034424627
LinkDB
All DBs
Position
18:15123296..15132221
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AA seq
213 aa
AA seq
DB search
MEAIWLYQFRLIVIGDSTVGKSCLIRRFTEGRFAQVSDPTVGVDFFSRLVEIEPGKRIKL
QIWDTAGQERFRSITRAYYRNSVGGLLLFDITNRRSFQNVHDWLEEARSHVQPHSIVFLL
VGHKCDLEAQRQVSRQEAEKLAGAYGMRYIETSARDAINVEHAFTELTRDIFALVRSGDI
TIQEGWEGVKSGFVPNVVHSSEEVTKSDRRCLC
NT seq
642 nt
NT seq
+upstream
nt +downstream
nt
atggaggcgatctggctctaccagttccggctgatcgtcatcggggactccacggtgggc
aagtcgtgtctgatccggcggttcacggagggccgcttcgcccaggtgtcggaccccacc
gtcggtgtggacttcttctcccggctggtggagatcgagccggggaagcggatcaagctg
cagatctgggacacggcgggtcaggagcgtttcaggtccatcaccagggcttactaccgc
aactctgtgggcgggctcctcctgttcgacatcaccaatcgccgctccttccagaacgtc
cacgattggctggaggaggctcgtagccacgtccaaccccacagcatcgtcttcctattg
gtcggccacaagtgcgacctggaggcccagcgccaggtgagccgtcaggaggcagagaag
ctggcgggggcttacgggatgcgctacatcgagacgtcggcccgtgacgccatcaacgtc
gagcacgccttcaccgagctcaccagagatatcttcgccttggtgcggtccggcgacatc
accatccaggagggctgggagggcgtgaagagcgggttcgtccccaacgtggttcactcc
tccgaggaagtgaccaagagcgaccgccgctgtctctgttga
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