Hippoglossus hippoglossus (Atlantic halibut): 117751824
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Entry
117751824 CDS
T07778
Name
(RefSeq) E3 ubiquitin-protein ligase Topors-like
KO
K10631
E3 ubiquitin-protein ligase Topors [EC:
2.3.2.27
]
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hhip04121
]
117751824
03036 Chromosome and associated proteins [BR:
hhip03036
]
117751824
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
hhip03037
]
117751824
Enzymes [BR:
hhip01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117751824
Ubiquitin system [BR:
hhip04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
117751824
UBL E3 ligases
117751824
Chromosome and associated proteins [BR:
hhip03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
117751824
Cilium and associated proteins [BR:
hhip03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
117751824
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4
zf-C3HC4_2
zf-RING_2
zf-C3HC4_3
zf-RING_UBOX
zf-rbx1
zf-RING_5
zf-C3HC4_4
zf-ANAPC11
PWI
Motif
Other DBs
NCBI-GeneID:
117751824
NCBI-ProteinID:
XP_034424670
LinkDB
All DBs
Position
18:13116635..13137606
Genome browser
AA seq
1493 aa
AA seq
DB search
MPLTARNSAGRRRKKPGEKLPEPPGESTSAQVMAPTRMKLRVRRRDAAGAGAGPGPGPGA
VGGGQPAEEEVRRRESSSSSRRKNSSNAPTAAATTSSPPNSSPPTSSASARAVVAAEDAS
PDSKCPICLDRFNNLAYLDRCLHRFCFPCIQEWSHNKAECPLCKQPFASILHSVRAEDDF
KEYTLRPAPANSSVAATVAMVAAMASAARSNHQMRLMLRRHRTADGLETTTRRRRRERGG
RGGGSRRTGVWEWYLDSPPLPLPPLPHHPAVSPVVAEDSGEGEDLDQQRMRGGADLAERG
VIFEGLTGLGGARTHNDRASRRLMTRLATRQRLQRDGGTVRRLRERETVAFRRALYRCSI
RVRGVAGVSGNQGQQCDITADSFRRNPVHLNKLRPWLRRELTVLYGAHGTLVDIVQRIIM
AQLARHGLEDSPTIEDELRPFLLARTDHFLHELVNFARSPLSLENYDLQAVYEPPAAALE
LDGISSPSDSSSVIAISEGEENEAGAGAHDDVIQTGSCLSLSGWDDETPGPSYSTAEPSC
SLASLSFSPAQQEAANQEGEKLEGEEECLIVGYKKPIAERTPELVQLSSDTEEEEEKEKM
TEKLPPPATTPPPLSYIPTIPPSTSATFQEEQDNKQKEKDGEAGGRCSRARSWSASSGRS
PETVCTLSPSEGQQDSRRDWKQSSSETAREKRKRRKRGPDRSGTLCNPNRSIYPAMMCHP
SHSPSPFHSSVESSSPPGSSCEYRCSPLTSSASSPSHSSSPFCFSPLLSSPLPQTPPSLS
PGDAHHRDKPGGKRKYKSRHLDSNDKDLTWNPYSGHPDEKQRERRRKRGRDGGRRRDTHR
RESVGSESISKRYREDRSPSVEIIYEGTILADATQPPARKRRRKRHRKTRHSSSPVIITL
DSDTSHENDGNNKPGGGGSSSSSPLSSQQTVDFSDLPPLPLVHSAGVGGALDEEIGELPV
DILDRGSDGSEAEPPGRSEAAGPVAVDNNSDHDVDVENVEESGSLLAGGPQPTGDNDFIP
ITTDLRKRNSAVSTSDTRLLATILDDLKGIAAPKCDLSLTFEPSHSPDSRKKRFQDLHEA
RSKLSSRLAEPRVPDVTDLPPCRKSTAPLPPLQQMDFRVGEDGVDVPPLLRQASPVRAHN
RNTPPPLKHKDAGSPHLSPADRLSPHSSADRHSNPAADSRLAPEAFPPNSALKKHFKSTL
ALRGVVAPDSRSAALTTSIKHTSPVDSSSASENGSTHTDGLPHLDVMNSFHSSEEHSSCD
VTEETSLSVRRSSPVHVDPVNSVDFHSAVSGWSKEKLPHTHSTSGGDQTFRPSSCRVVPA
DLHVSSSGVAGGLPAGSGVFSGVNSNDTSPLLLSTVDSRTPNHSSPVRSLPVDVLRKSSK
CTDPRSSCAAAERLTDTFSVVNREDTSPPVDFHCMNPSPATDGHFNHAASPTSHRKCLSE
PSVESLSKHSTDLRHHNHFDPVDAHRDDRVTSSPHNQWNSNASADAHSDSVAL
NT seq
4482 nt
NT seq
+upstream
nt +downstream
nt
atgcctctcacggcgcggaactctgccgggaggaggaggaagaaaccgggtgagaagctc
ccggagccaccgggggagtcgacttctgctcaggtgatggcgcccacgcggatgaaactg
cgtgtgcgtcgccgtgatgctgcaggtgcaggtgcaggtccaggtccaggtccaggtgcg
gtaggaggcggtcagcctgcggaggaagaggtgaggagacgagagagcagcagcagcagc
cgcaggaagaactccagcaatgctccaaccgcagccgccactacctcctctcctcccaac
tcctctcctcctacctcctccgcctcagcgagggcggtggtcgcggcagaggacgcttcg
cctgactccaagtgccccatctgtctggaccgcttcaacaacctggcgtacctggaccga
tgcctgcaccgcttctgcttcccctgcatccaggagtggtcacacaacaaggccgagtgt
ccgctctgcaagcagccgttcgcctccatcttgcactcggtccgcgccgaggacgacttc
aaggaatacacgctgcggccggcgcctgccaacagcagcgttgccgccactgtggcaatg
gtggcggcgatggcgtcagcggcaaggagcaaccatcaaatgaggttgatgttaaggaga
caccggacggcagacggtctagaaacgaccacgaggaggcggaggagagagaggggggga
agaggaggaggaagcaggaggacaggggtgtgggagtggtaccttgattctcctcctctt
cctctccctcctcttcctcaccatccagctgtctctcccgtggtggcggaggacagtgga
gagggtgaagacctggaccagcagaggatgaggggaggagcagacctggcggagcgaggg
gtgatatttgagggactgacaggcctcggaggggcgaggacgcacaacgaccgggcgtca
cggcggctgatgacccgtctggcaacaaggcagcgactgcaacgagacggtggaactgtg
cggcgtctgagggagagagagactgtagcgttccgccgcgctctctaccgctgtagcata
cgggtccgtggcgttgccggggtcagcggtaaccagggacagcaatgtgacatcacagca
gacagcttccgtcgtaaccctgtccacttgaacaaacttcgaccctggttgcggcgggag
ctcacagtgctctacggtgctcacggcacgctggtcgacatagtccaacgcatcatcatg
gcgcagcttgcccgccacgggctggaggactcacccaccatagaggacgagctgcgtcca
ttcctgttggctcgcaccgaccatttcctgcatgaactggtaaatttcgcccgctcacca
ctcagtctggaaaactatgacttgcaggcggtgtatgagccaccggccgccgccctagag
ctggatgggatcagcagcccctctgacagcagctctgttatcgcaatatcagagggcgag
gaaaacgaggctggagcgggcgctcatgatgatgtcatccaaacaggaagctgcctcagt
ctgtcgggttgggatgacgagactccaggcccctcctactccactgctgagccgtcgtgt
tcgcttgcctcgctgtcgtttagccccgcccaacaagaggcggccaatcaggagggggag
aagctggagggggaggaggagtgtctgatagtgggatacaagaagccgatcgctgagcga
actcctgagctggtgcagctgtcatccgacaccgaggaagaggaggagaaggagaagatg
acggagaagcttcctcctcccgccaccacccctcctcctctttcttacatacccacaatc
cccccctccacatctgccaccttccaagaggagcaggacaacaagcagaaggagaaagat
ggcgaagcgggcgggcgttgttcacgtgcgcgttcatggtcggccagctctggaaggagc
ccagagacggtgtgcacgctcagcccaagcgaggggcagcaggacagccggagagactgg
aagcagtccagcagtgagacggccagggagaagaggaagaggaggaagagggggccggac
aggagcggaactctgtgcaacccaaaccgctccatctatcccgccatgatgtgccacccc
tcacactccccttcaccgtttcactccagcgtagagtccagttctccacccggctcaagc
tgtgagtaccgctgctcccctctcacctcctccgcctcctccccatcacactcctcctcg
cccttctgcttctccccgctgctgtcgtcgccgcttccgcagacgccgccctcgctctcc
cccggcgacgctcaccacagagacaaacccggcgggaagaggaagtacaagagccgccac
ctggacagcaacgacaaggaccttacctggaatccatacagtgggcaccctgacgagaag
cagcgagagaggaggaggaaaagggggagagacggagggaggaggagagatacacacagg
agggagagtgttggtagtgagagcatcagcaagaggtatcgagaagaccgcagtcccagc
gtggagatcatctacgagggcacaatcctcgccgacgcaacgcagccccccgccaggaaa
cgccgcaggaaacgccaccggaagacacgacacagcagctctccagtcatcatcaccctc
gacagcgacactagccacgaaaacgacggcaacaacaagcccggcggcggcggcagcagc
agcagcagtccgctcagcagccagcagaccgtcgacttctccgacctccctccgctcccg
ttggtgcattctgccggtgtgggcggggccttggatgaagagatcggcgaacttcctgta
gacatcctggacagagggtcagatgggtcggaggcggagccgccaggacggtcggaagct
gctggtcccgtcgccgttgacaacaacagcgatcacgatgtggatgtggaaaacgtagag
gagagcgggtcactgttggccggcggccctcagccaaccggagacaacgatttcatcccc
ataacgacggatcttcgcaaaagaaactctgcggtctcgacctctgacactcgtctccta
gcaaccatcctcgacgacctgaagggaatcgctgctcctaaatgtgacctttctctgacc
tttgaacccagtcattcacccgactcaaggaaaaagcgttttcaggatctgcacgaggct
cggtcgaagctgagcagcaggttggctgagccgagagttcctgatgtcacagacctgccg
ccatgtcgtaagtccaccgctccgctgcctcctcttcagcaaatggatttcagggttgga
gaggacggcgtggacgtccccccgctcctcagacaggccagtcctgtgcgagcccacaac
agaaacacgccaccaccattaaaacacaaagatgcaggaagtcctcacctctcccctgct
gaccgcctctcgcctcactcctctgctgaccgccattctaatcccgctgctgactcccgc
ttggcccctgaggccttccccccaaattcagcgctgaagaaacatttcaaaagcactctg
gcgttgagaggagttgtggcgcctgactcacgttcggccgctttaaccactagcatcaaa
cacacgagtcccgttgattcatcgtctgcttctgaaaacggttccactcatacagatggt
ttaccacatctggacgtcatgaactcttttcattcgtcggaggaacattccagctgtgat
gtcacagaagagacttctctctctgttcgtagatcttcacccgttcacgttgatcccgtt
aattctgttgatttccattcagccgtcagcggctggtccaaagagaagctgcctcacact
cactctacctccggaggcgatcagacttttaggccctcttcctgtcgggtggtgcccgcc
gacttgcacgtttccagtagtggtgttgctggaggcttaccagcaggtagtggcgttttc
tcaggagttaattccaacgacacgtctcctcttttgctttcaactgttgattccaggact
ccgaatcactcgtctcccgtcaggtcgttgcccgttgacgtccttcgtaaaagttccaaa
tgcactgacccccgctcttcctgtgcagctgcagagcgactgacggacacgttttcagtc
gtcaaccgtgaggacacatcaccacctgttgatttccactgtatgaatccgtcaccagcc
actgacggacacttcaaccacgcagcctcacccacgtcacacagaaagtgtctttctgaa
ccttcggtcgagtcgctctcaaaacactcaactgatttaaggcatcacaaccactttgat
cctgtcgacgcccacagagacgatcgcgtcacgtcctccccacacaaccagtggaactca
aacgcctccgctgacgcccactcggactctgtcgccctttga
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