Hippoglossus hippoglossus (Atlantic halibut): 117752125
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Entry
117752125 CDS
T07778
Symbol
si:cabz01101003.1
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase CYLD
KO
K08601
ubiquitin carboxyl-terminal hydrolase CYLD [EC:
3.4.19.12
]
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip04217
Necroptosis
hhip04622
RIG-I-like receptor signaling pathway
hhip04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
117752125 (si:cabz01101003.1)
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
117752125 (si:cabz01101003.1)
04625 C-type lectin receptor signaling pathway
117752125 (si:cabz01101003.1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
hhip01002
]
117752125 (si:cabz01101003.1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hhip04121
]
117752125 (si:cabz01101003.1)
Enzymes [BR:
hhip01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
117752125 (si:cabz01101003.1)
Peptidases and inhibitors [BR:
hhip01002
]
Cysteine peptidases
Family C67
117752125 (si:cabz01101003.1)
Ubiquitin system [BR:
hhip04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
117752125 (si:cabz01101003.1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAP_GLY
UCH
DUF7571
Motif
Other DBs
NCBI-GeneID:
117752125
NCBI-ProteinID:
XP_034425195
LinkDB
All DBs
Position
18:15202278..15209792
Genome browser
AA seq
966 aa
AA seq
DB search
MSGAQEQLRRRRPPKMFVISTDLKVQDHLDGTIRLQRGFICQEQDVSRNRGEWQWVKVLD
NDVVVKLDRKFLLPIPSDLNGLLEPVFDPEARLKLLTNLGKLRHLSSLPVDAPLWVQMGQ
QDELAEAELKYIGPLTRGSSAVYFGVQLKGSAAGKGSGNGSYKGLRLFTCPDACALFVPA
NEIRLRHWSNRNGSNAPERVRERDQHRSSNNHHSNGHQSNNSHPTHHHHQQQQQQHHHPS
SSAPQPHSIGILPRTSESALITAQTQAQVRQPASPPLPPPLSVGQRVCFPLEDNVYGGEV
RFCGLLPGRSSSGLYVGVLLDAPVGNWDGLYRGEKLCHIPSTVYGLLLPATKVSSEPKHN
RPSAHQMPKSILKPPPDTKPGLISSPTTAPKVAPLPPPKPTKKPLLPPPLPPPKPRSPTS
PILSEQLQHTNGVHGPVSPLLSPDRLEASGEGEEAGLEGELEVGSMVEVNDPPIFGVICW
IGRISGISEPVAGIELDQELSAGTDGSYLGVRHFRCPANKGLFVKLRNCRRDSRFPAPET
PVNQVERCNSIAFAEWGSERVEEHTPPVDGDEARELYQGWKRGIQGHLNSCYLDATLFSL
FSCCSSADWVLFWPADSDTDQSSTQAQDLLRCEIVNPLRSFGYVCASKTMALRRLLEAAD
RDTGFTNQEKDPEEFVNRLFQLLRVEPLLKIRSMTRQPQECHLYQLFPPTLPSSPSSPAP
LSPVDSPIPLSSPSSNRMRVASVQTLLESSFLHAGLKFVEAPSCLLLLMPRFGKDFKMFD
AILPTLSLDITDLLDDTVRQCSICQAVAEWECLQCYEDVDITPGRLKQYCPTCNTQVHSH
RKRTSHTPVKVGVPGRSWTGPLHCTRQRMSLFAVTCIETSHYVSFIKHGPLPTDWLFFDS
MADREGGENGFNIPRVMACPEVGRYLGLSEQELSRVDAASLREPARRLLCDSYMCLYHSP
ELSLYK
NT seq
2901 nt
NT seq
+upstream
nt +downstream
nt
atgtccggggctcaggagcagctcaggaggcgtcgccccccgaaaatgttcgtgatctcg
accgacctgaaggtccaggaccacctggacggaaccattcggctgcagcgggggttcatc
tgccaggagcaggacgtgagcaggaaccgaggggagtggcagtgggtcaaggtgttagac
aatgacgttgtggtaaagttagacaggaagttcctgcttccaatcccgagtgacctcaac
ggcctgttggagccggtgttcgatcccgaggctcgtctgaagcttctaactaatcttggg
aagctgcggcatctgtcctctctgcccgtcgacgctccgctctgggtgcagatgggtcaa
caggacgagcttgcagaggccgagctgaagtacatcgggccgctgaccagagggagcagc
gctgtgtacttcggggtccaactcaagggttcagcggcgggcaaaggatccggcaacggt
tcctataagggcctccgacttttcacctgccccgacgcctgcgcccttttcgtccctgcc
aatgaaattaggctccgccactggagtaacagaaatggctccaatgcacctgagcgagtc
cgcgagcgggaccaacaccgcagcagcaacaatcaccatagcaacgggcaccagagcaac
aacagccacccgacccatcaccaccatcaacagcagcagcagcagcatcatcatcccagc
agcagcgctcctcagccgcactctatcggcatcctccctcgcacatcggagtcggcgctc
atcactgctcaaacccaggcgcaggttcgacagcctgcgtcgcctccgctgccgccgcct
ctcagcgtcggccagcgggtgtgtttccccctggaggacaacgtctatggaggggaggtg
cggttctgcgggctcctgccgggccgctcctcctcagggctgtacgtcggcgttctgctg
gacgctcctgtcggtaactgggacgggctttaccggggagagaagctctgccacattcct
tccaccgtctacggactcctgctgccagccaccaaggtttcctcagagcctaaacacaac
cgtcccagtgctcaccaaatgcccaaatccatcctgaagccccctcccgacaccaaacca
ggtctcatatcatcgcccaccactgctcccaaggtcgctccactgccgccacccaagccc
accaagaaacccctgcttcctcccccgctcccgcctccaaaaccccgcagtccgacgtca
cccatcctttcagagcaactgcaacacaccaacggcgtccacggccccgtctccccgctg
ctgtctccagatcgcctcgaagcgtcgggggagggtgaggaggcgggactggagggggag
ctggaggtgggctcgatggttgaagtgaacgaccctcccatctttggagtgatttgctgg
atcgggcgaatcagtgggatttcagaaccagtcgccggaatcgagctggatcaggagctg
tctgcaggaacagacggcagctacctcggtgtgcgccacttccgttgtccggcgaacaag
gggctgtttgtcaagctacgcaactgcaggagggactccaggttcccggcacccgagacg
cccgtcaatcaagtggagcgctgcaactccatagcctttgcagagtggggcagcgagcgc
gtggaggagcacacgcctcccgtggacggagacgaggccagagagctctaccagggctgg
aagagaggcatccagggtcacctgaactcctgctacctggacgctacgctgttcagtctg
ttctcctgctgtagttcagcagactgggttttgttttggccggccgactctgacaccgac
caaagctcgactcaggctcaggacctgctgcgctgtgagatcgtcaacccgctgcgcagc
tttggctacgtgtgtgccagtaagaccatggccctgaggcgcctcctggaggctgccgac
agagacaccggcttcactaaccaggagaaagatccggaggagttcgtcaacaggcttttc
cagctcctccgagtcgagccgctcctcaagatcagatcgatgactcggcagcctcaggaa
tgtcacctctaccagctcttcccaccgacgctgcccagctctccctcctcgccagcaccc
ctctcaccagtcgactcccccatccctctctcctcgccatcctccaatcggatgagagtc
gccagcgtccagacgctgctggagtcctccttcctccacgccggcctcaagtttgttgag
gccccctcctgcctcctgctgctcatgccccggtttgggaaggacttcaaaatgtttgac
gccatcttgcccacactcagcctggacatcaccgacctgctggacgacactgtgaggcag
tgcagcatctgtcaggctgtggctgagtgggagtgtctgcagtgttacgaagatgtagac
atcacccccgggcgtctcaagcagtactgccccacctgcaacacacaggtccacagtcac
aggaagcggacgtcccacaccccagtgaaggtcggtgtccccggcagatcgtggaccggc
cctcttcactgcacccgccagcgaatgtctctcttcgctgtgacgtgcatcgagaccagc
cactacgtgagcttcatcaaacacgggcccctccccactgactggctgttttttgacagc
atggcggacagagaaggtggcgagaacggcttcaacatcccccgggtgatggcgtgtccc
gaggtgggtcgctacctcggcctatcggagcaggagctgagcagagtggacgccgcgtca
ctgcgggagccggcccgccgcctgctctgtgactcctacatgtgcctgtaccacagcccc
gagctcagcctgtacaagtga
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