Hippoglossus hippoglossus (Atlantic halibut): 117752219
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Entry
117752219 CDS
T07778
Symbol
poln
Name
(RefSeq) DNA polymerase nu isoform X1
KO
K16618
DNA polymerase nu [EC:
2.7.7.7
]
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
117752219 (poln)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hhip03400
]
117752219 (poln)
Enzymes [BR:
hhip01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
117752219 (poln)
DNA repair and recombination proteins [BR:
hhip03400
]
Eukaryotic type
TLS (translesion DNA synthesis) factors
A-family DNA polymerase
117752219 (poln)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
DNA_pol_P_Exo
ISP_coupler
Motif
Other DBs
NCBI-GeneID:
117752219
NCBI-ProteinID:
XP_034425314
LinkDB
All DBs
Position
18:12448186..12488716
Genome browser
AA seq
1496 aa
AA seq
DB search
MEQSSCRLSSGPLSQAAQRILAVLQAQRNSNSHRPMERFYDSQREPWVQSSSNMNQEERK
DRGTDRPWSRPQVSSFPASHHDSSSERQISQTSADYQCSQTPESSLSSQAASCSSSSSCW
DPTLQRETSQTEARYQCSQAYSHRKHSKPPSYQSSQAPSSIQCEAETFSHRDRYNLSLQI
PPRLSEHQWRNNTEEIRPSFILSLSPDDRSPDEVLFPTVENPDTHKEEPVLVYQPVSTCH
STSYDTDNSTSGPLKDAKGWNILRNEPEDAVASDTRLKGKQLLSDPTEEATSGGEDGRIL
YLQSEAETIKTGRTLLPPSHCVTRQETCCYSNSPKLMRHGDVQEDMEQTLDVSEAASGKM
PDGEHEIHKGANGVKNKETGQVDATLQNKTGSPDEMKGRLLGTNEITSLGRNLASTASNM
DKSFLCYPEVAKSGQKEDNDAVYKLNTLEVKNVEHPPVIESKEIPVGCYTGRPERATHTV
NPEGALVQCEPNTLIQCDATADDLDRATERRVDEVMKSGFEVETERRTNSGIHTGTEDEM
ETEQSFSDVQIKFETGRREERELQRRDTKPEEKGTDRDESVMLQEDREDETSTEDSGRER
CPTPTSLDCDARGSEVNVSFLHLHHGNVQTTDTSVSGTSSRTVLAPANPFATGQNSSAVQ
GLASSAVQPNRLGNCNPLSTFQTHLNQHRLSLSSPLKRKHEALQQQDNALPKICLTRRHL
KWKPPCSSQEKARERGVRPSTSIPEHPVVPPQPQTNDSPWHEKGKVTEVHTHSDVPQQTR
QKRSKLESTRNVSKLTRASVTCKLPQHKRANYGPDHDTNGSKTSHDWAKKTETLTSDPRV
KASGKLSTNERTQMLEKAEQAKTLVLTMVYQDGATQLDPEQKLPPAVCGLLVLMIGDHLD
RSTAEDSLGPNDSLVYLKLSEQTPAWAQQHTLQSQELFTRDVLLQVLSRRQLVVCYKAKD
LLRTALQFYKGELTCKQVAGCRIQDPQVSGWLLDPADPSSCFQDLLNKHCKRPRTTPALG
AKRVSQIISSLSSLYWLNMELCSKLQNQRLWELYSDMELNMIPVLAAMESHHIHVDKEAL
KRMSDLLGTKMKQLEQEAHRAAGQIFLVTSSTQLRTVLFEKLRLHERCENKKLPKTINTQ
QQSTSEAALLQLQDLHPLPKIILEYRQIHKIKSTFVDGILSCMMSKNYISSTWYQTSVVT
GRISAKHPNFQALPRQPLQITKKQYIQGKEEEVVTVHPRAMFIPQKGCTFLAADFCQVEL
RLLAHLSSDPELLRVFTNPQADVFTMLASQWKGVSESEVTSEDREHAKRIVYSVVYGAGR
ERLSGILGVSAHQASQFQDSFLQTYRDVQAFIQRTIQLCHKQGYVLSIMGRRRTLPNINS
PDWAIRMQAERQAVNFTVQGSAADLCKVAMIRIFNLVATTSLTARLIAQLHDELLYEVDD
SQVENFAALVKSTMESLQHIDQLGLHLKVPLKVAVSSGKSWGSMTELKIPSASPSL
NT seq
4491 nt
NT seq
+upstream
nt +downstream
nt
atggagcagtctagctgcaggttgtcctcaggacctctgtcccaggcggcccagaggatt
ctggctgttctgcaggcccagcgtaactccaacagtcacaggccaatggagaggttttat
gacagccagagggagccttgggtccagagcagcagcaacatgaatcaagaggagagaaaa
gacagaggcacagatcggccgtggtccagaccccaggtgtcctcatttccagcctctcac
cacgactcctccagtgagaggcagatctctcagacctcggccgactatcagtgctcgcag
acaccagaaagctccctgtcatcccaggccgcctcctgttcctcctcctcctcctgctgg
gatcccacactccaaagggagacgtctcagactgaagcccgttatcagtgctcacaggcc
tattcccacagaaagcactccaaacccccttcttaccagtccagccaggcaccatcatcg
attcagtgtgaggcagaaaccttctcccatagagacagatacaacctgtctctccaaata
ccaccaaggctttctgaacatcagtggagaaacaacactgaagaaatcaggccatctttc
atcctcagtctttctccagacgataggagtcctgatgaggtattgttccccacagtggaa
aacccagatacccataaagaggagcctgttctggtttatcagccagtctcaacctgtcat
agcacaagttatgatacagacaatagcacatcgggtcccctgaaagatgcaaaaggctgg
aacatcctcagaaatgagccagaagacgctgtagcttcagacactcgcctcaagggcaag
caacttctgtctgaccccactgaagaggccactagtggaggagaagatgggcggatatta
tatctgcaatcagaggctgaaacaatcaaaactggaaggacacttttacctcccagtcat
tgtgtaacaaggcaagagacatgctgttattcaaattcacccaagctgatgagacatgga
gatgtgcaggaagatatggagcagacactggatgtgtctgaggcagcttctggaaaaatg
ccagatggtgaacatgaaatacacaaaggagcaaatggggttaagaataaagagacagga
caagtggatgcaaccctacaaaataagacagggtcacccgatgaaatgaaaggacgtcta
ctgggaaccaatgagatcaccagtttagggaggaacttggcatctacagcaagtaatatg
gacaaaagcttcctttgttatcctgaggttgcaaagtcagggcagaaagaagataatgac
gctgtgtacaaacttaatacacttgaagtaaaaaatgttgagcatccacctgtcattgag
agtaaggagataccagtgggatgttatactggcagaccagaaagggcaacccacacagtg
aacccagaaggagcactagtgcagtgtgagcccaacacattaatccagtgtgacgccact
gctgatgacctggacagggccacagagagaagagtagatgaagtgatgaagagtggattt
gaagtggaaactgagcgcaggacaaattcaggaattcatacagggactgaagatgagatg
gagacagaacagagtttttctgatgtccagataaagtttgagacaggtcgtagagaagag
agagagttacagagaagagacactaagccagaagagaaggggacggacagagatgagtca
gtgatgcttcaagaggacagggaagatgagacatctacagaggactcggggagagagcgc
tgtcccacaccgacgtccctggactgtgatgcacgagggtcagaggtgaacgtgtccttt
ctccatctgcaccatggcaacgtgcaaaccaccgatacaagcgtcagtgggaccagttca
aggacagtactggctccagcaaacccttttgctactggacaaaactcctcagcagtccag
ggcttggcctcttctgcagtacaaccaaacagactgggaaactgcaacccactctctact
ttccagactcatttaaatcagcatcgtctttccctgtcctcccctctgaagaggaaacat
gaagcacttcagcaacaggataacgctcttcccaaaatctgcctaacaaggcgtcatcta
aaatggaaaccaccttgttcctcacaagaaaaggcaagggaaagaggagtcaggcccagt
acctccatccctgaacatccagtggttcctccacaaccacagactaatgacagtccttgg
catgaaaagggaaaagtaacagaggtacatacacactcagatgtcccacagcaaactcga
caaaagcgcagtaagttggaatccaccaggaatgtttccaaactgactcgagcctctgtg
acctgcaaactaccccagcacaagcgggccaattatgggcctgaccatgacacaaatgga
tcaaaaacatcccatgactgggctaagaagactgaaaccctgacgtccgacccaagagta
aaggcttctgggaagctgagcacaaacgagaggacgcagatgcttgagaaggcagagcag
gccaagactctggtgctgactatggtgtatcaggacggagccacacagttagacccagag
cagaagctccctccagcagtgtgtgggctcctcgtgctgatgatcggggaccatctggac
cgcagcacagcggaggactctctggggccaaacgacagtctggtctatttaaaactgtct
gaacaaacacctgcatgggcccagcaacacaccctccagagccaggagctcttcactagg
gatgtgctgctacaggtgctttcaagacgtcaactggtggtgtgttataaagccaaggat
ttgcttcgtacggctctgcagttttacaaaggagaacttacctgtaaacaagtggcaggc
tgtcgtatccaggacccacaggtgtcaggttggctgctggatcctgccgatccctcctct
tgcttccaggatcttctcaataaacactgtaaaagacccagaacaacacctgccctgggt
gcaaagagggtttctcagatcatctccagcctctcatccctctactggcttaacatggag
ctatgctctaaactgcagaaccagaggctgtgggagctttactccgacatggagctgaac
atgattcctgtcctggcagccatggagagtcatcacatccacgtggacaaagaggctctg
aagagaatgtcagacctgttggggactaagatgaagcagctggagcaggaggcccacaga
gcagcaggacaaatattcctggtcaccagcagcactcagctacgaacagtcctgtttgag
aagctgcggctccacgagcgctgcgagaacaagaaacttcccaagaccatcaacacacag
cagcagtccacatcagaagctgcattgttgcagcttcaggacctgcatcctcttccaaag
atcattctggagtacagacagattcacaagatcaagtccacttttgttgatgggattctc
tcatgcatgatgagtaagaactacatttcctctacatggtaccagacgagtgttgtgact
gggagaatctctgcaaaacacccaaacttccaggcgctgcccagacagcctcttcaaatc
accaagaagcagtacatccaaggaaaggaggaggaggtggtgacagttcacccccgagcc
atgttcatccctcagaagggctgcaccttccttgctgcagacttctgccaggtggagctg
cgtctcttagctcatctctcctccgaccctgagctgctccgtgtttttaccaacccccaa
gctgacgtctttaccatgctggcctctcagtggaagggggtgagtgagagtgaggtgacc
tcagaggatcgggaacacgctaagcgcatcgtctactctgttgtgtacggggcaggccgc
gagcgactatcagggatcttgggtgtgagtgcccaccaggccagtcagttccaggacagt
ttcctccagacctacagagatgtccaggccttcatccagaggaccatccagctgtgccac
aaacaaggttatgtgttgtccatcatgggtcgtcgacgaaccctccccaacatcaactct
ccagattgggcaatccgcatgcaggctgaaaggcaggctgtgaactttacagtccaaggt
tctgctgctgacctctgtaaggtggccatgatccggatcttcaacctcgtggccaccacc
tcactcactgccaggctgatagcgcagctccatgacgagctcctgtacgaagtggacgac
tcacaggtggaaaactttgcagcgttggtgaagagcaccatggagtccctgcagcacatc
gaccagctgggcctccatctcaaggtccccctaaaggtggcggtctccagtgggaagtcc
tggggatccatgactgagcttaagatcccttcagcatctccttctctttga
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integrated database retrieval system
