Hippoglossus hippoglossus (Atlantic halibut): 117752232
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Entry
117752232 CDS
T07778
Symbol
dennd4c
Name
(RefSeq) DENN domain-containing protein 4C isoform X1
KO
K20163
DENN domain-containing protein 4
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hhip04131
]
117752232 (dennd4c)
Membrane trafficking [BR:
hhip04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
117752232 (dennd4c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DENN
uDENN
dDENN
DUF2464
PPR_2
PPR_3
PPR
PPR_long
Motif
Other DBs
NCBI-GeneID:
117752232
NCBI-ProteinID:
XP_034425331
LinkDB
All DBs
Position
18:7375857..7408716
Genome browser
AA seq
1924 aa
AA seq
DB search
MLEDKGHRVTDYFVVAGLTDKSKPLEQDLSEAKSSGPKAPITDLAVINRSAGETVPEGFT
CIDSTYSGQPANLNHGSLKSPELFLCYRRGRGKPPLIDIGVLYEGKERLIQGCEVIQATP
YGRCANVNNSSATSQRIFITLRRAPPVQPQNSLAVTDICVIVTSKGETPPHTFCKVDKNL
NCGMWGSNVFLCYKKSVSASNSISYKAGLIFRYPEEDYESFPLSESVPLFCLPMGANIEC
WAPNTRNPLPVFSTFVLTISSGEKVYGSAIQFYEPHSVDLLSEKQKIQLGLITTVEKKMI
PNRHVNTNKCICLLSRWPFFESFRKFLMFLYKLSVSGPHPLPIEKHISHFMHNVSFPSPQ
RPRILVQLSAHDNLILSQPVCTPLPLSGADYGTLLMNLGAENCATLLHFVLLESKILLHS
LRPAVLTGVAESVVAMIFPFQWQCPYIPLCPLSLAGVLNAPCPFIVGVDSRYFDLYDPPP
DVVCVDLDTNTIYLSDEKKHNNWKNLPKKPGKSLISTLTNLHHQLATVSVCQTVEEDSAV
VITPIEADFTWQKKKTALEMEIQETFLRFMASILKGYRSYLKPITQAPSVKATAADSLYD
LQGFLKSRDRAHQKFYSQLTKTQIFIRFIEECTFVSDKDTGLAFFDDCVEKLFPSDKITD
KGTKVEGESSEDTRLLELDESQKSEHTVFVMPAEPSPDDGPGPAPRYTYKSFPRLNMDLF
DRPRGLRPALSTRAAGASLSSSPALLAKRTKQEIKLAYKMAKRFYSNPPLWARCLFSHCY
SLWFICLPAGVRLAKSKSRAMQQAYNVLLKMRTTEVEVLDEVCYRVVMQLCGVWGLPVMA
VRVLVEMKKAGVHPNAITYGYYNKAVLESPWPSRNRSGLFMWTKLRNVLRGVAQFKQALV
PKTSMKGPTLSGTAASKGVSADADVDGLSHGSADSSNGVNGEEHNLFAHSHGMEDATVNH
CITGRQSDQGYGSKDELHQELAEPSHAAVLLSEQSKNTKAQHNGGDIAGSVDSAVTVSEP
PSPVDVPSPVPSIVKPSTGNYDGEAVTGKLFRRHSKNNKVSLPDDDAPLASGDVASQSQQ
QRQKSFSERSCSFSAESRAGMLLEKGVDHMASQMGADARILAAALSAGQTPPPSSVSKAL
FKDLEEEPEDDQGLMHGKLPAEDEPGASEKGKENDEDVEGSEEQIEKEELKQTEAHEDES
GVRGATLERADVKVGADPLSLLVSESEESASVTSQEPPRSVPAVVSRNLAEEIEMYMSLR
SPMGAKSSSMELQQSQGDSTDPPQPTKTMERRSSLPVPPVNTPSGSPGDTPKRSPNTVTR
SKTFVAKTKAHARTTASPSNRSSSLTALVKSSQGGSLGSVINSISGIKMDTLLSGPKIDV
LKSSMKQAANVASKVWGAVASAYSYSDDEDEQAQGGGGGFPSNLDEHTLAAHDVDESPDR
GIIPGLVANGLNQSCTSLGSSSGSSDTGRGTHQMHPTPGRAGRGPDSEQSSLHHASSSSI
YQNCALEVLMSSCSQCRSCEALVYDEEIMAGWTADDSNLNTNCHFCQAAFLPFLHVEFHD
LRTLTGFYMNPSASGDSIHSAHPTASGSADIKTQDLISFPEEEPRETPDDRPGTHNSLIP
EPVQSDPLGLLEHNSAGKQQRCSGTSLTRSNSVGGPLQSLDYSQRPGHGVSTTSLPCSLQ
EVSDGMGTKRPNPKPVSVPYLSPLVLRKELETLMENEGDQVIYTHKFLSQHPIIFWNLVW
YFRRLELPTHLPGLILTSEHCNNGVQLPLTSLSQDSKQVYVQLLWDNINLHREPREPLYL
LWRSLLEKKGTLAPTDHQEIRTLLNTIVRSIQTNDVYGPINLLIREIKRCPEGTKRQRSI
YREILFLSLVSLGRENIDVEAFDREYRMAYDELSPEQLKSLHRIDQPPTPSVQWCLKSFG
APFI
NT seq
5775 nt
NT seq
+upstream
nt +downstream
nt
atgctcgaggacaagggtcaccgtgtgaccgactactttgtggtggctgggctgacagac
aagtccaagcccttggagcaggacctgtcggaggccaagtccagcgggcccaaagctccc
atcacagacctggccgtcatcaacaggtcggcaggagagacagtgcctgagggcttcacg
tgcatcgacagcacctacagcggccaaccggccaacctgaaccatggcagccttaagagc
cccgagctgttcctgtgctacaggaggggtcgggggaagcctccccttatcgacatcggg
gttctttatgagggcaaggagcgtctgatccagggctgcgaggtcatccaggccacccca
tacggccgctgcgccaacgtcaacaacagctcggccacctcgcagcgcatcttcatcacc
ctccgtcgagcgccacccgtccagcctcagaattccctggcagtgacggacatttgcgtc
attgtcaccagcaaaggggagacgccgccacataccttttgcaaagtggacaagaacctc
aactgtggcatgtggggctccaatgtgttcctgtgttacaagaaatcagtatctgcgtcc
aattccatcagttacaaagccggtctaatctttcgttacccagaagaggactacgagtct
ttccctctgtccgagtcagtccccctgttttgtttgcctatgggagccaatatcgagtgt
tgggcaccaaacacacgcaaccctctgcctgtcttctccacgtttgtcttaaccatctca
tctggtgaaaaggtgtacggatcagccatccagttctacgagccgcattccgtggatctg
ttgagtgagaaacagaagatccagctgggcctgatcaccaccgtggagaagaagatgatt
cctaaccggcatgtaaacaccaataagtgcatctgtctgctctcccgttggcccttcttc
gagtccttccgcaagttcctcatgttcctctacaaactatctgtctcgggcccgcacccg
ctgcctattgagaagcacatctcacacttcatgcacaatgtgtcatttccttcccctcag
aggccaagaatcttggtccagctctcagcacatgacaacttgatcctctcccagcccgtg
tgcacacctttacccctcagtggggccgactacggcacgctcctgatgaacctgggcgcg
gagaactgcgccacgcttctgcactttgtcctccttgagagcaagatcctgctgcactcg
ctccggcccgctgtgctcaccggagtggccgagtctgttgtggctatgatctttcccttc
cagtggcagtgtccctacatccccctgtgcccactctctctagctggtgtcctcaacgct
ccttgtccgttcatagtgggtgtggactcgcgctactttgacctttatgaccccccgcca
gatgttgtctgtgtggacctggacaccaacactatctacctgtctgatgagaagaaacac
aacaactggaagaacctcccaaaaaagcctggcaagagcctcattagcacactgaccaac
ttgcaccaccagctggccactgtttccgtgtgtcaaacagttgaggaggactcggcagtg
gttataacccccatcgaggcggacttcacctggcaaaaaaagaagacggccctggagatg
gaaatccaggagacctttctgcgcttcatggcctccatcctgaagggctaccgctcctac
ctcaaacccatcacccaggcaccctctgtaaaggccacagctgccgactctctctacgac
ctacaaggttttctcaaaagcagagaccgtgcccatcagaagttctactcccagctcacc
aagacccagatattcatccgcttcatcgaggagtgcaccttcgtcagcgacaaggacacc
ggattggcgttttttgacgattgcgtggagaagctttttccctctgataaaatcacagac
aagggcaccaaggttgaaggcgagtcatcggaggacacaagacttctggagctggatgaa
tctcagaagagtgagcacaccgtgtttgtgatgcccgccgaaccttcacctgacgatgga
cctggccctgcccctcgatacacctacaaaagtttccccagattgaatatggatctgttt
gaccgtcccagagggttacgtccagcactgagcaccagagcagcgggggccagtttgtcc
agcagccctgctctactggcaaagaggacgaagcaggagatcaagctcgcttacaagatg
gcaaagcgtttctactccaaccctccgctgtgggcccgctgtctcttcagtcactgctat
agcctgtggttcatctgcctgccagcgggcgtgcggctggccaagtccaagagccgtgcc
atgcagcaggcgtacaacgtcctcctgaagatgaggaccactgaggtggaggtgctggat
gaggtgtgttacagagtagtaatgcagctctgtggtgtgtggggtcttcctgttatggct
gtgcgagtcctggttgagatgaagaaagctggtgtgcaccccaacgccatcacatatgga
tattacaacaaggctgtcttggaaagcccctggccaagccgaaaccgcagcggcctgttt
atgtggaccaagcttcgcaatgtgcttcgaggagtggcccagttcaagcaagctctggtc
ccaaagacttccatgaagggacccacacttagtggcacagctgcatcaaaaggagtatca
gcagacgctgacgttgacggtttgagtcatggcagtgctgacagctcaaatggcgtcaat
ggggaggaacataacctatttgcccacagccatggcatggaagatgcaacagtaaaccac
tgtattacagggaggcaatctgatcaaggctacggctccaaggatgagctacaccaggag
ctggcagagccttcacatgcagctgtcctgttgtccgaacagagtaaaaataccaaagca
caacacaacgggggcgacattgccggctcagtggacagtgcagtcacagtatcagaaccc
ccaagtcctgttgatgtgccctcacctgtcccgagcattgtaaagccgtctacagggaac
tatgatggtgaagcagttacagggaagctgttcaggagacacagcaagaacaataaagtg
tctctccctgatgacgacgcccctctagcatcaggggacgtggccagccagtctcaacaa
cagcggcagaaatccttctctgagcgcagctgtagcttcagcgctgaaagtcgtgctgga
atgctcctagagaaaggcgtggaccacatggccagccagatgggcgccgatgctcgcatc
ctggctgcagcgctttctgccggtcaaactccacctcccagcagtgtgtccaaagcactt
tttaaagatctggaggaggaacctgaagacgatcagggcttgatgcatgggaagctacca
gcggaagacgagccaggggcatcagaaaaagggaaggaaaatgacgaagatgtggaaggg
agtgaggaacaaatagaaaaagaagaactaaagcaaactgaagcacatgaagatgaatct
ggggtacgaggagcaactctggagagggcagacgtgaaggtgggtgctgacccactttcc
ctcctggtatcagagagtgaagagtcggcctctgttaccagccaggagccaccgcgctcg
gtgccagccgtggtgtcccgcaacctggctgaggagatcgaaatgtacatgagcctgagg
agtcctatgggtgccaagtcctccagcatggaactccagcagtcccagggagactccact
gacccccctcagcccacaaagaccatggagcgcaggtccagccttcccgtgcctcctgtc
aatactccgagtggctctccgggcgacacacccaagcgcagccccaacactgtcactcgc
tccaagacatttgtcgcaaagacaaaagcccatgcccgcaccacggccagcccgagtaat
aggtcgtcctcactgacagcactagtcaagtcctcgcagggagggtctctgggctcagtc
ataaactctatttcaggcataaagatggacactctgttgtcgggccctaaaattgatgtg
ctaaagtcgagcatgaagcaggcggcaaatgtagccagcaaagtgtggggggcagtggca
tcagcttactcctactcagatgatgaggatgaacaagctcagggtggtggcggtggcttc
ccatcaaatctggatgagcacacgttggctgcacacgatgtcgatgagagccctgataga
gggatcatcccaggtttggtggccaatggtttgaaccagagctgcaccagcctaggcagc
agcagtggcagcagcgacacaggcagagggacccaccagatgcatccaaccccaggacga
gcaggcaggggtcccgactctgagcaaagctccttacatcacgcttcctcctcaagcatc
taccaaaactgtgcattggaggtgctgatgtcgagctgctcccagtgccgctcctgtgag
gctctggtgtatgatgaggagatcatggcaggctggacagccgatgactccaacctcaat
accaactgtcatttctgtcaagcagccttccttccctttttgcacgtcgagtttcatgac
ttgcgcacgttaaccgggttctatatgaatcccagtgcctcaggagacagtatccacagc
gcccatcccacagccagcggttcagctgacattaagacacaagaccttatcagtttccct
gaggaggaacctagagagacaccagatgatcgacccggaactcataatagtctgattccg
gagccggtgcagtctgaccctctgggtctgctagagcacaactctgcagggaagcagcag
agatgcagcgggacgtcactgacgcgcagcaacagtgttggaggaccgttgcagagcctg
gactactcccagagacctggtcacggtgtatccacaaccagcttgccctgcagcctgcaa
gaggtgtcggatggcatggggaccaaacggcccaaccccaagcctgtgtctgtgccgtac
ctcagccccttggtgctacgtaaggagctggagaccctgatggagaatgagggggatcag
gtgatctacacccacaagttcctgagccagcaccccatcatcttctggaacctggtgtgg
tatttccgccgcttggaactgcccactcatttacccggtctaattctgacctctgaacac
tgcaacaatggagtacagctccctctgacgtcactgtcccaggacagtaagcaggtgtat
gtccagctcctgtgggacaacatcaacctgcaccgggaacctagagaacccctctacctg
ctgtggaggagcttgttggagaagaagggaacgctggctccgaccgaccaccaggagatc
cgcaccctcctcaacacaattgttcgcagcatccagaccaatgacgtctacggaccaatc
aacctgttgatccgagagatcaagcggtgcccggaggggaccaaacggcaaaggagtatc
tatagagaaatactgtttctgtcactggtgtcgttgggacgggagaacatcgatgtagag
gccttcgacagggagtaccgcatggcttacgacgagctgagccccgagcagctcaagtcg
ttgcaccgcatcgatcagccacccacccccagcgttcagtggtgccttaaaagcttcgga
gccccgttcatctga
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integrated database retrieval system
